RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 NASPP49321 788 aaPredicted RBP18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 ZNF410Q86VK4 478 aa18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 POF1BQ8WVV4 589 aa18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 PRPF31Q8WWY3 499 aaKnown RBP18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 SPATA32Q96LK8 384 aa18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 CASD1Q96PB1 797 aa18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 CWH43Q9H720 699 aa18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 COL4A3BPQ9Y5P4 624 aa18.96■□□□□ 0.63
PRPF40A-204ENST00000450303 POTEMA6NI47 508 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 GOLGA6L22H0YM25 854 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 IRS1P35568 1242 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 HYAL1Q12794 435 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 PTGDRQ13258 359 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 EMC2Q15006 297 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 SLC39A14Q15043 492 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 LONRF3Q496Y0 759 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 NAALADL2Q58DX5 795 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 CLEC17AQ6ZS10 378 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 LRRC55Q6ZSA7 311 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 CATSPER4Q7RTX7 472 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 COLGALT1Q8NBJ5 622 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 KCNG4Q8TDN1 519 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 HSD17B14Q9BPX1 270 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 INO80BQ9C086 356 aaPredicted RBP18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 TMEM117Q9H0C3 514 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 CLDND1Q9NY35 253 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 PCDHB12Q9Y5F1 795 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 PCDHGC5Q9Y5F6 944 aa18.95■□□□□ 0.62
PRPF40A-204ENST00000450303 XIRP2A4UGR9 3374 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 A0A0U1RQF3 1178 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 SPTLC2O15270 562 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 OR52Z1P0C646 297 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 SFPQP23246 707 aaKnown RBP eCLIP18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 LAMTOR4Q0VGL1 99 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 GSE1Q14687 1217 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 LEXMQ3ZCV2 418 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 CLLU1OSQ5K130 101 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 ARL6IP4Q66PJ3 421 aaKnown RBP18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 ABI1Q8IZP0 508 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 LINC00301Q8NCQ3 95 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 HELQQ8TDG4 1101 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 PSPC1Q8WXF1 523 aaKnown RBP18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 PABPC5Q96DU9 382 aaKnown RBP18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 IFT122Q9HBG6 1241 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 AAASQ9NRG9 546 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 DACT1Q9NYF0 836 aa18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 PIN4Q9Y237 131 aaKnown RBP18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 MORC2Q9Y6X9 1032 aaPredicted RBP18.94■□□□□ 0.62
PRPF40A-204ENST00000450303 PPP6R2O75170 966 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 ATF7P17544 494 aaPredicted RBP18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 PBX3P40426 434 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 PRPHP41219 470 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 TECP42680 631 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 ATP2C1P98194 919 aaPredicted RBP18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 TWF2Q6IBS0 349 aaKnown RBP18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 ADGRD2Q7Z7M1 963 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 ZNF598Q86UK7 904 aaKnown RBP18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 EXOC8Q8IYI6 725 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 THNSL1Q8IYQ7 743 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 PIGOQ8TEQ8 1089 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 LPPQ93052 612 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 MTRQ99707 1265 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 MINDY3Q9H8M7 445 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 XPNPEP1Q9NQW7 623 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 CHST12Q9NRB3 414 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 RCOR1Q9UKL0 485 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 PPME1Q9Y570 386 aa18.93■□□□□ 0.62
PRPF40A-204ENST00000450303 LINC01565O15544 149 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 HOXA2O43364 376 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 FGF18O76093 207 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 LYPLA2O95372 231 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 EOMESO95936 686 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 PHKA2P46019 1235 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 PTPAQ15257 358 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 PTCRAQ6ISU1 281 aaPredicted RBP18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 DTHD1Q6ZMT9 781 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 RBM23Q86U06 439 aaKnown RBP18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 NEK9Q8TD19 979 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 MICAL1Q8TDZ2 1067 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 LEO1Q8WVC0 666 aaPredicted RBP18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 TCP11Q8WWU5 503 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 RAB34Q9BZG1 259 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 ANKEF1Q9NU02 776 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 NCOR1O75376 2440 aa18.92■□□□□ 0.62
PRPF40A-204ENST00000450303 SPATA31C1P0DKV0 1188 aa18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 IL9P15248 144 aa18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 LAG3P18627 525 aa18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 LTBRP36941 435 aa18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 DLX2Q07687 328 aaPredicted RBP18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 CLUL1Q15846 466 aa18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 C4orf32Q8N8J7 132 aa18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 RNF149Q8NC42 400 aa18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 CCDC43Q96MW1 224 aaKnown RBP18.91■□□□□ 0.62
PRPF40A-204ENST00000450303 GOLGA6L4A6NEF3 574 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 MEIS3P2A8K0S8 358 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 ASAP2O43150 1006 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 MED24O75448 989 aa18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 MARCKSP29966 332 aaPredicted RBP18.9■□□□□ 0.62
PRPF40A-204ENST00000450303 ME1P48163 572 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms