RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 KCNC3Q14003 757 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 SMAD2Q15796 467 aaKnown RBP13.79□□□□□ -0.2
MSH5-209ENST00000450148 UBXN11Q5T124 520 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 TWF2Q6IBS0 349 aaKnown RBP13.79□□□□□ -0.2
MSH5-209ENST00000450148 CATSPER4Q7RTX7 472 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 IFNLR1Q8IU57 520 aaPredicted RBP13.79□□□□□ -0.2
MSH5-209ENST00000450148 GJD3Q8N144 294 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 SLC39A11Q8N1S5 342 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 VN1R2Q8NFZ6 395 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 TCP11Q8WWU5 503 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 MTRQ99707 1265 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 FOXP1Q9H334 677 aaPredicted RBP13.79□□□□□ -0.2
MSH5-209ENST00000450148 BDP1A6H8Y1 2624 aa13.79□□□□□ -0.2
MSH5-209ENST00000450148 C19orf67A6NJJ6 358 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 ASAP2O43150 1006 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 OFD1O75665 1012 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 EYA4O95677 639 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 ATP2B1P20020 1258 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 ARL2P36404 184 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 PTENP60484 403 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 RBM10P98175 930 aaKnown RBP13.78□□□□□ -0.2
MSH5-209ENST00000450148 ZP2Q05996 745 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
MSH5-209ENST00000450148 CLUL1Q15846 466 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 DUSP6Q16828 381 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 AGMOQ6ZNB7 445 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 MRPL10Q7Z7H8 261 aaKnown RBP13.78□□□□□ -0.2
MSH5-209ENST00000450148 RBM23Q86U06 439 aaKnown RBP13.78□□□□□ -0.2
MSH5-209ENST00000450148 ABI1Q8IZP0 508 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 C4orf32Q8N8J7 132 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 RNF149Q8NC42 400 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 PIGOQ8TEQ8 1089 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 PPP2R3CQ969Q6 453 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 ZNF558Q96NG5 402 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 C11orf16Q9NQ32 467 aa13.78□□□□□ -0.2
MSH5-209ENST00000450148 TDRD15B5MCY1 1934 aaKnown RBP13.78□□□□□ -0.2
MSH5-209ENST00000450148 PI4K2BG5E9Z4 385 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 PER2O15055 1255 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 B4GALT3O60512 393 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 MED24O75448 989 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 DGAT1O75907 488 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 SKIP12755 728 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 XRCC6P12956 609 aaKnown RBP eCLIP13.77□□□□□ -0.21
MSH5-209ENST00000450148 PPM1AP35813 382 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 RAB27AP51159 221 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 BCAR1P56945 870 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 POU5F1BQ06416 359 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 COASYQ13057 564 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 ORC2Q13416 577 aaPredicted RBP13.77□□□□□ -0.21
MSH5-209ENST00000450148 SMAD4Q13485 552 aaKnown RBP13.77□□□□□ -0.21
MSH5-209ENST00000450148 ZNF174Q15697 407 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 LONRF3Q496Y0 759 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 PDE12Q6L8Q7 609 aaKnown RBP13.77□□□□□ -0.21
MSH5-209ENST00000450148 TMEM173Q86WV6 379 aaPredicted RBP13.77□□□□□ -0.21
MSH5-209ENST00000450148 CATSPER3Q86XQ3 398 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 SMRP1Q8NCR6 262 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 MRPL9Q9BYD2 267 aaKnown RBP13.77□□□□□ -0.21
MSH5-209ENST00000450148 NRDE2Q9H7Z3 1164 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 TLE6Q9H808 572 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 TBC1D13Q9NVG8 400 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 SPG21Q9NZD8 308 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 PRKAG3Q9UGI9 489 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 CD207Q9UJ71 328 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 BARX2Q9UMQ3 279 aaPredicted RBP13.77□□□□□ -0.21
MSH5-209ENST00000450148 PCDHB2Q9Y5E7 798 aa13.77□□□□□ -0.21
MSH5-209ENST00000450148 HIDE1A8MVS5 230 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 NT5C1B-RDH14C9J2C7 533 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 TSPAN1O60635 241 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 CD2BP2O95400 341 aaKnown RBP13.76□□□□□ -0.21
MSH5-209ENST00000450148 OR52Z1P0C646 297 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 GLRA2P23416 452 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 U2AF2P26368 475 aaKnown RBP eCLIP13.76□□□□□ -0.212e-6■□□□□ 8.1
MSH5-209ENST00000450148 TECP42680 631 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 NDUFV1P49821 464 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 TOB1P50616 345 aaPredicted RBP13.76□□□□□ -0.21
MSH5-209ENST00000450148 AFF1P51825 1210 aaKnown RBP13.76□□□□□ -0.21
MSH5-209ENST00000450148 CAPSQ13938 189 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 MXD4Q14582 209 aaPredicted RBP13.76□□□□□ -0.21
MSH5-209ENST00000450148 NBR1Q14596 966 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 RABEP1Q15276 862 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 AMHR2Q16671 573 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 TTC38Q5R3I4 469 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 PLPP4Q5VZY2 271 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 TMEM184AQ6ZMB5 413 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 NOSTRINQ8IVI9 506 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 SMG8Q8ND04 991 aaKnown RBP13.76□□□□□ -0.21
MSH5-209ENST00000450148 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 RSPH1Q8WYR4 309 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 CDCA3Q99618 268 aaPredicted RBP13.76□□□□□ -0.21
MSH5-209ENST00000450148 TCF25Q9BQ70 676 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 POLR3CQ9BUI4 534 aaPredicted RBP13.76□□□□□ -0.21
MSH5-209ENST00000450148 TUFT1Q9NNX1 390 aa13.76□□□□□ -0.21
MSH5-209ENST00000450148 GALTP07902 379 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 NCLP19338 710 aaKnown RBP13.75□□□□□ -0.21
MSH5-209ENST00000450148 RPA1P27694 616 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 MBTD1Q05BQ5 628 aa13.75□□□□□ -0.21
MSH5-209ENST00000450148 PCBP1Q15365 356 aaKnown RBP eCLIP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms