RNA–Protein interactions for RNA: ENST00000449617.5

SEC22C-209, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 2

Gene SEC22C, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-209ENST00000449617 LONRF3Q496Y0 759 aa14.58□□□□□ -0.08
SEC22C-209ENST00000449617 TTC38Q5R3I4 469 aa14.58□□□□□ -0.08
SEC22C-209ENST00000449617 KCNT2Q6UVM3 1135 aa14.58□□□□□ -0.08
SEC22C-209ENST00000449617 SRGAP1Q7Z6B7 1085 aa14.58□□□□□ -0.08
SEC22C-209ENST00000449617 LPPQ93052 612 aa14.58□□□□□ -0.08
SEC22C-209ENST00000449617 ZNF558Q96NG5 402 aa14.58□□□□□ -0.08
SEC22C-209ENST00000449617 FAM105AQ9NUU6 356 aa14.58□□□□□ -0.08
SEC22C-209ENST00000449617 MEIS3P2A8K0S8 358 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 ASAP2O43150 1006 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 DGAT1O75907 488 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 SKIP12755 728 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 TECP42680 631 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 NRIP1P48552 1158 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 RAB27AP51159 221 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 MXD4Q14582 209 aaPredicted RBP14.57□□□□□ -0.08
SEC22C-209ENST00000449617 NBR1Q14596 966 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 RBM23Q86U06 439 aaKnown RBP14.57□□□□□ -0.08
SEC22C-209ENST00000449617 ASAP3Q8TDY4 903 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 MICAL1Q8TDZ2 1067 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 MRPL9Q9BYD2 267 aaKnown RBP14.57□□□□□ -0.08
SEC22C-209ENST00000449617 UPF2Q9HAU5 1272 aaKnown RBP14.57□□□□□ -0.08
SEC22C-209ENST00000449617 TUFT1Q9NNX1 390 aa14.57□□□□□ -0.08
SEC22C-209ENST00000449617 USO1O60763 962 aaKnown RBP14.56□□□□□ -0.08
SEC22C-209ENST00000449617 MED24O75448 989 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 CD2BP2O95400 341 aaKnown RBP14.56□□□□□ -0.08
SEC22C-209ENST00000449617 HOXA11P31270 313 aaPredicted RBP14.56□□□□□ -0.08
SEC22C-209ENST00000449617 PPM1AP35813 382 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 NDUFV1P49821 464 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 ERVFC1P60507 584 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 PLCB3Q01970 1234 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 ADAM15Q13444 863 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 GLB1LQ6UWU2 654 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 CATSPER3Q86XQ3 398 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 FAM178BQ8IXR5 827 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 EFHBQ8N7U6 833 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 MRPS27Q92552 414 aaKnown RBP14.56□□□□□ -0.08
SEC22C-209ENST00000449617 CD320Q9NPF0 282 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 SPG21Q9NZD8 308 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 NOL7Q9UMY1 257 aaKnown RBP14.56□□□□□ -0.08
SEC22C-209ENST00000449617 LZTS1Q9Y250 596 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 INPP5FQ9Y2H2 1132 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 PCDHB2Q9Y5E7 798 aa14.56□□□□□ -0.08
SEC22C-209ENST00000449617 FSCN2O14926 492 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 ZNF623O75123 536 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 U2AF2P26368 475 aaKnown RBP eCLIP14.55□□□□□ -0.083e-6■■■■□ 23.8
SEC22C-209ENST00000449617 ARL2P36404 184 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 PTENP60484 403 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 CAPSQ13938 189 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 TFDP1Q14186 410 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 UBXN11Q5T124 520 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 PLPP4Q5VZY2 271 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 ERMNQ8TAM6 284 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 TMX3Q96JJ7 454 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 POLR3CQ9BUI4 534 aaPredicted RBP14.55□□□□□ -0.08
SEC22C-209ENST00000449617 POLR3FQ9H1D9 316 aaPredicted RBP14.55□□□□□ -0.08
SEC22C-209ENST00000449617 TLE6Q9H808 572 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 PUF60Q9UHX1 559 aaKnown RBP14.55□□□□□ -0.08
SEC22C-209ENST00000449617 FAM50BQ9Y247 325 aa14.55□□□□□ -0.08
SEC22C-209ENST00000449617 INO80B-WBP1J3KQ70 363 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 PER2O15055 1255 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 TSPAN1O60635 241 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 ZC3H11AO75152 810 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEC22C-209ENST00000449617 ERLIN2O94905 339 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 GLP2RO95838 553 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 XRCC6P12956 609 aaKnown RBP eCLIP14.54□□□□□ -0.08
SEC22C-209ENST00000449617 GLRA2P23416 452 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 TOB1P50616 345 aaPredicted RBP14.54□□□□□ -0.08
SEC22C-209ENST00000449617 BCAR1P56945 870 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 NOMO2Q5JPE7 1267 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 PDE12Q6L8Q7 609 aaKnown RBP14.54□□□□□ -0.08
SEC22C-209ENST00000449617 IFNLR1Q8IU57 520 aaPredicted RBP14.54□□□□□ -0.08
SEC22C-209ENST00000449617 SLC39A11Q8N1S5 342 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 C4orf32Q8N8J7 132 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 RSPH1Q8WYR4 309 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 TCF25Q9BQ70 676 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 GPRC5CQ9NQ84 441 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 ENTPD7Q9NQZ7 604 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 TBC1D13Q9NVG8 400 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 CD207Q9UJ71 328 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 DBR1Q9UK59 544 aaKnown RBP14.54□□□□□ -0.08
SEC22C-209ENST00000449617 KIF3AQ9Y496 699 aa14.54□□□□□ -0.08
SEC22C-209ENST00000449617 NT5C1B-RDH14C9J2C7 533 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 OFD1O75665 1012 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 RPA1P27694 616 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 ALDH7A1P49419 539 aaKnown RBP14.53□□□□□ -0.08
SEC22C-209ENST00000449617 KRT17Q04695 432 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 MBTD1Q05BQ5 628 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 POU5F1BQ06416 359 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 SMAD4Q13485 552 aaKnown RBP14.53□□□□□ -0.08
SEC22C-209ENST00000449617 AGMOQ6ZNB7 445 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 MAEAQ7L5Y9 396 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 GJD3Q8N144 294 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 KHSRPQ92945 711 aaKnown RBP eCLIP14.53□□□□□ -0.082e-7■■□□□ 13.8
SEC22C-209ENST00000449617 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 CPB2Q96IY4 423 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 MSLNLQ96KJ4 702 aa14.53□□□□□ -0.08
SEC22C-209ENST00000449617 NACC1Q96RE7 527 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms