RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 TRIM9Q9C026 710 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 ZNF510Q9Y2H8 683 aa14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 COL2A1P02458 1487 aaPredicted RBP14.52□□□□□ -0.09
SYNGAP1-204ENST00000449372 H0YIN7 160 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 ECE2O60344 883 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 CHN1P15882 459 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 MPP3Q13368 585 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 CLEC10AQ8IUN9 316 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 LRRC15Q8TF66 581 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 PBKQ96KB5 322 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 PIGSQ96S52 555 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 SLX1AQ9BQ83 275 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 SCOCQ9UIL1 159 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 RAD51CO43502 376 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 RNASE9P60153 205 aaKnown RBP14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 TSNAXIP1Q2TAA8 658 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 Q4G0T1 1027 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 SLC17A8Q8NDX2 589 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 PPP1R12CQ9BZL4 782 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 PLCG1P19174 1290 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 ANXA13P27216 316 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 ASPRV1Q53RT3 343 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 KLHL7Q8IXQ5 586 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 PHC3Q8NDX5 983 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 SELENOSQ9BQE4 189 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 ISCUQ9H1K1 167 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 FBXL5Q9UKA1 691 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 CD2APQ9Y5K6 639 aa14.51□□□□□ -0.09
SYNGAP1-204ENST00000449372 SLC26A4O43511 780 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 TTLL1O95922 423 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 SHBGP04278 402 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 PEX5P50542 639 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 INF2Q27J81 1249 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 CEP72Q9P209 647 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 SART1O43290 800 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 PPP1R11O60927 126 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 CALB2P22676 271 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 GSTT1P30711 240 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 TATDN1Q6P1N9 297 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 TSHZ1Q6ZSZ6 1077 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 ANKRD13CQ8N6S4 541 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 GBP7Q8N8V2 638 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 NSRP1Q9H0G5 558 aaKnown RBP14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 FAM207AQ9NSI2 230 aaPredicted RBP14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 ZNF543Q08ER8 600 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 BNIP1Q12981 228 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 SIAH1Q8IUQ4 282 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 CCDC65Q8IXS2 484 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 SERPINA10Q9UK55 444 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 TRIM33Q9UPN9 1127 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 ATRNL1Q5VV63 1379 aa14.5□□□□□ -0.09
SYNGAP1-204ENST00000449372 DDTLA6NHG4 134 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 YDJCA8MPS7 323 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 CES2O00748 559 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 ZNF189O75820 626 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 WFS1O76024 890 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 FKBP3Q00688 224 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 RPS6KA1Q15418 735 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 LETM2Q2VYF4 491 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 FOXB2Q5VYV0 432 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 POTEAQ6S8J7 498 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 IRF2BP1Q8IU81 584 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 SYCE1Q8N0S2 351 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 MKL1Q969V6 931 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 CEP63Q96MT8 703 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 VCX3BQ9H321 246 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 RNPEPL1Q9HAU8 725 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 VCX3AQ9NNX9 186 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 E7ENQ6 273 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 SMAPO00193 183 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 CCNT1O60563 726 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 PFDN1O60925 122 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 PENKP01210 267 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 PLEKP08567 350 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 ACADSP16219 412 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 CLK2P49760 499 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 GALNTL6Q49A17 601 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 CMPK2Q5EBM0 449 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 LRRC47Q8N1G4 583 aaKnown RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 DNAJC9Q8WXX5 260 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 IFT43Q96FT9 208 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 NAP1L3Q99457 506 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 TTYH3Q9C0H2 523 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 GLT8D2Q9H1C3 349 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 STK24Q9Y6E0 443 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 KDM3AQ9Y4C1 1321 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 SMCO2A6NFE2 343 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 GSTA2P09210 222 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 ERVK-9P63128 1117 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 RASA3Q14644 834 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 ASIC2Q16515 512 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 ANKRD40Q6AI12 368 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 DDX42Q86XP3 938 aaKnown RBP eCLIP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 MYOCDQ8IZQ8 938 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 NT5C3AQ9H0P0 336 aa14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 STMN4Q9H169 189 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 TSPYL2Q9H2G4 693 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-204ENST00000449372 JMJD4Q9H9V9 463 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms