RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 INTS8Q75QN2 995 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 RRAGAQ7L523 313 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 ABRAQ8N0Z2 381 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 EHBP1Q8NDI1 1231 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 MORC4Q8TE76 937 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 AFAP1L1Q8TED9 768 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 BAP1Q92560 729 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 SLC35C1Q96A29 364 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 BORCS6Q96GS4 357 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 NIFKQ9BYG3 293 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 DEF6Q9H4E7 631 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 BCAS3Q9H6U6 928 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 NHEJ1Q9H9Q4 299 aaPredicted RBP11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 MLXIPQ9HAP2 919 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 LZTFL1Q9NQ48 299 aa11.55□□□□□ -0.56
VIPAS39-203ENST00000448935 LRRC53A6NM62 1247 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 SLC16A4O15374 487 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 KRT86O43790 486 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 STRNO43815 780 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 PEX10O60683 326 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 N4BP1O75113 896 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 NPTX2P47972 431 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 CASP4P49662 377 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 CYP2J2P51589 502 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 POLGP54098 1239 aaPredicted RBP11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 POLR2FP61218 127 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 CETN1Q12798 172 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 TUBB2AQ13885 445 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 SLC9C1Q4G0N8 1177 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 PPP2R2DQ66LE6 453 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 KCNN1Q92952 543 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 TUBB2BQ9BVA1 445 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 TSGA10Q9BZW7 698 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 AZI2Q9H6S1 392 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 LUC7LQ9NQ29 371 aaKnown RBP11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 PDLIM7Q9NR12 457 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 PCDHGA4Q9Y5G9 962 aa11.54□□□□□ -0.56
VIPAS39-203ENST00000448935 TMEM150BA6NC51 233 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 GGPS1O95749 300 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 SERPING1P05155 500 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 STAT5BP51692 787 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 FSTL1Q12841 308 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 BFSP1Q12934 665 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 MTERF2Q49AM1 385 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 C6orf132Q5T0Z8 1188 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 TRMT1LQ7Z2T5 733 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 USP37Q86T82 979 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 MAP4K3Q8IVH8 894 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 KSR1Q8IVT5 923 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 CCDC155Q8N6L0 562 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 XXYLT1Q8NBI6 393 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 TMEM161BQ8NDZ6 487 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 ACRBPQ8NEB7 543 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 SLC7A3Q8WY07 619 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 VTI1AQ96AJ9 217 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 PARK7Q99497 189 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 CRACR2AQ9BSW2 395 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 L2HGDHQ9H9P8 463 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 GPRC5CQ9NQ84 441 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 MORF4L1Q9UBU8 362 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 LIMD1Q9UGP4 676 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 DDX41Q9UJV9 622 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 TBX20Q9UMR3 447 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 BZW2Q9Y6E2 419 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 IVNS1ABPQ9Y6Y0 642 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 PLXNB2O15031 1838 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 GSTTP1A0A1W2PQM5 241 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 DENND3A2RUS2 1198 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 BTBD19C9JJ37 291 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 EPHB6O15197 1021 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 P4HA2O15460 535 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 CTIFO43310 598 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 GAS2O43903 313 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 AKR1B10O60218 316 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 NOL4O94818 638 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 SLU7O95391 586 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 PGK2P07205 417 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 RFX1P22670 979 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 SLC26A2P50443 739 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 ENPEPQ07075 957 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 TTLL4Q14679 1199 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 EMC2Q15006 297 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 CELF3Q5SZQ8 465 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 KLHDC7AQ5VTJ3 777 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 SH2D3AQ9BRG2 576 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 GANQ9H2C0 597 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 DHX33Q9H6R0 707 aaKnown RBP11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 RRAGCQ9HB90 399 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 NLRC4Q9NPP4 1024 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 AIPL1Q9NZN9 384 aa11.53□□□□□ -0.56
VIPAS39-203ENST00000448935 KIAA0391O15091 583 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 URI1O94763 535 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 CELF2O95319 508 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms