RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 ZCCHC17Q9NP64 241 aaKnown RBP7.59□□□□□ -1.19
RFC4-209ENST00000448497 PLCB1Q9NQ66 1216 aa7.59□□□□□ -1.19
RFC4-209ENST00000448497 EVA1BQ9NVM1 165 aa7.59□□□□□ -1.19
RFC4-209ENST00000448497 PKD2L1Q9P0L9 805 aa7.59□□□□□ -1.19
RFC4-209ENST00000448497 ARMCX3Q9UH62 379 aaPredicted RBP7.59□□□□□ -1.19
RFC4-209ENST00000448497 FBXL5Q9UKA1 691 aa7.59□□□□□ -1.19
RFC4-209ENST00000448497 MYO6Q9UM54 1294 aa7.59□□□□□ -1.19
RFC4-209ENST00000448497 PLAGL2Q9UPG8 496 aa7.59□□□□□ -1.19
RFC4-209ENST00000448497 PPP2R2CQ9Y2T4 447 aa7.59□□□□□ -1.19
RFC4-209ENST00000448497 FCF1Q9Y324 198 aaKnown RBP7.59□□□□□ -1.19
RFC4-209ENST00000448497 ASB14A6NK59 587 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 H0YCG3 227 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 RNF225M0QZC1 329 aaPredicted RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 BACH1O14867 736 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 PMM2O15305 246 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 FARP2O94887 1054 aaPredicted RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 CCDC175P0C221 793 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 EPB41P11171 864 aaKnown RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 NMT1P30419 496 aaKnown RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 PSMC2P35998 433 aaKnown RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 ETF1P62495 437 aaKnown RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 SP2Q02086 613 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 IRF5Q13568 498 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 KCTD2Q14681 263 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 PPP2R5AQ15172 486 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 PTPN21Q16825 1174 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 XKR9Q5GH70 373 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 DNTTIP2Q5QJE6 756 aaKnown RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 TRIM65Q6PJ69 517 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 WDR59Q6PJI9 974 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 METTL7BQ6UX53 244 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 CCDC60Q8IWA6 550 aaPredicted RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 C2orf69Q8N8R5 385 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 CCDC43Q96MW1 224 aaKnown RBP7.58□□□□□ -1.2
RFC4-209ENST00000448497 ACCSQ96QU6 501 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 PRM3Q9NNZ6 103 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 AGPAT3Q9NRZ7 376 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 CEP72Q9P209 647 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 GABBR1Q9UBS5 961 aa7.58□□□□□ -1.2
RFC4-209ENST00000448497 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.58□□□□□ -1.2
RFC4-209ENST00000448497 ZSWIM8A7E2V4 1837 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 PHLPP2Q6ZVD8 1323 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 RBM47A0AV96 593 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 SFI1A8K8P3 1242 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 NKRFO15226 690 aaKnown RBP eCLIP7.57□□□□□ -1.2
RFC4-209ENST00000448497 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 USO1O60763 962 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 LGR5O75473 907 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 AKAP3O75969 853 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 F12P00748 615 aaPredicted RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 AFPP02771 609 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 XRCC5P13010 732 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 UBA1P22314 1058 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 SLC26A2P50443 739 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 SMTNP53814 917 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 PRKCEQ02156 737 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 GOLGA8FQ08AF8 430 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 GOLGA8DPQ0D2H9 430 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 KCNMA1Q12791 1236 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 KCNH2Q12809 1159 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 HSP90AA2PQ14568 343 aaPredicted RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 TARBP2Q15633 366 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 ZC2HC1CQ53FD0 456 aaPredicted RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 SPRYD7Q5W111 196 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 MAP1SQ66K74 1059 aaPredicted RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 SWSAP1Q6NVH7 229 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 DPY19L2P1Q6NXN4 242 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 CCDC62Q6P9F0 684 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 RAD9BQ6WBX8 426 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 HAUS6Q7Z4H7 955 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 EXOC8Q8IYI6 725 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 TMEM161BQ8NDZ6 487 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 GPRC5AQ8NFJ5 357 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 MYRIPQ8NFW9 859 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 NEK11Q8NG66 645 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 KIF18AQ8NI77 898 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 CPLX3Q8WVH0 158 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 BRI3BPQ8WY22 251 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 BAP1Q92560 729 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 SLC35C1Q96A29 364 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 FAM167AQ96KS9 214 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 C16orf45Q96MC5 204 aaPredicted RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 CEP89Q96ST8 783 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 MMP19Q99542 508 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 PAGR1Q9BTK6 254 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 DHX33Q9H6R0 707 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 CYP26B1Q9NR63 512 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 AGPAT5Q9NUQ2 364 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 ZNHIT6Q9NWK9 470 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 MYO1AQ9UBC5 1043 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 DDX41Q9UJV9 622 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 EXOC7Q9UPT5 735 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 USP20Q9Y2K6 914 aa7.57□□□□□ -1.2
RFC4-209ENST00000448497 DIS3Q9Y2L1 958 aaKnown RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 EPN1Q9Y6I3 576 aaPredicted RBP7.57□□□□□ -1.2
RFC4-209ENST00000448497 EMSYQ7Z589 1322 aa7.56□□□□□ -1.2
RFC4-209ENST00000448497 UTRNP46939 3433 aa7.56□□□□□ -1.2
RFC4-209ENST00000448497 CCL15-CCL14A0A0B4J2E2 113 aa7.56□□□□□ -1.2
RFC4-209ENST00000448497 GSTTP1A0A1W2PQM5 241 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms