RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 CEP57L1Q8IYX8 460 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 ASAP3Q8TDY4 903 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 NLRP4Q96MN2 994 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 SCLT1Q96NL6 688 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 OSMRQ99650 979 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 FDXACB1Q9BRP7 624 aaPredicted RBP19.54■□□□□ 0.72
HLCS-205ENST00000448340 GCOM2Q9BZD3 368 aaPredicted RBP19.54■□□□□ 0.72
HLCS-205ENST00000448340 GOLPH3LQ9H4A5 285 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 C17orf75Q9HAS0 396 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 ODF2LQ9ULJ1 636 aa19.54■□□□□ 0.72
HLCS-205ENST00000448340 KRT18P05783 430 aaKnown RBP19.53■□□□□ 0.72
HLCS-205ENST00000448340 SRGAP2CP0DJJ0 459 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 GHRP10912 638 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 EIF4BP23588 611 aaKnown RBP19.53■□□□□ 0.72
HLCS-205ENST00000448340 MAPK7Q13164 816 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 CAPSQ13938 189 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 GIT2Q14161 759 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 PPP2R2DQ66LE6 453 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 TSHZ1Q6ZSZ6 1077 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 DEFB128Q7Z7B8 93 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 DAW1Q8N136 415 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 RNF149Q8NC42 400 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 ZNF668Q96K58 619 aaPredicted RBP19.53■□□□□ 0.72
HLCS-205ENST00000448340 IFT74Q96LB3 600 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 INO80BQ9C086 356 aaPredicted RBP19.53■□□□□ 0.72
HLCS-205ENST00000448340 IFT122Q9HBG6 1241 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 POLD4Q9HCU8 107 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 KCNG1Q9UIX4 513 aa19.53■□□□□ 0.72
HLCS-205ENST00000448340 TET1Q8NFU7 2136 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 NPHP3-ACAD11A0A0J9YXS1 232 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 MYMKA6NI61 221 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 ACTN4O43707 911 aaKnown RBP19.52■□□□□ 0.72
HLCS-205ENST00000448340 GADD45BO75293 160 aaPredicted RBP19.52■□□□□ 0.72
HLCS-205ENST00000448340 DARSP14868 501 aaKnown RBP19.52■□□□□ 0.72
HLCS-205ENST00000448340 ATP2A2P16615 1042 aaKnown RBP19.52■□□□□ 0.72
HLCS-205ENST00000448340 NAMPTP43490 491 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 PHKA2P46019 1235 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 UBE2HP62256 183 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 RAD51AP2Q09MP3 1159 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 LONRF3Q496Y0 759 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 PLEKHG4Q58EX7 1191 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 ODR4Q5SWX8 454 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 FAM43BQ6ZT52 329 aaPredicted RBP19.52■□□□□ 0.72
HLCS-205ENST00000448340 SRGAP1Q7Z6B7 1085 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 IFNLR1Q8IU57 520 aaPredicted RBP19.52■□□□□ 0.72
HLCS-205ENST00000448340 TMEM40Q8WWA1 233 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 BSNDQ8WZ55 320 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 DDX12PQ92771 950 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 REEP2Q9BRK0 252 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 NFKBIZQ9BYH8 718 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 OSBPL7Q9BZF2 842 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 AGO3Q9H9G7 860 aaKnown RBP19.52■□□□□ 0.72
HLCS-205ENST00000448340 SERTAD1Q9UHV2 236 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 MTCH2Q9Y6C9 303 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 TRANK1O15050 2925 aa19.52■□□□□ 0.72
HLCS-205ENST00000448340 MYH11P35749 1972 aa19.52■□□□□ 0.71
HLCS-205ENST00000448340 PRPF40AO75400 957 aaKnown RBP19.51■□□□□ 0.71
HLCS-205ENST00000448340 RPS6KA5O75582 802 aa19.51■□□□□ 0.71
HLCS-205ENST00000448340 ZNF202O95125 648 aa19.51■□□□□ 0.71
HLCS-205ENST00000448340 ZNF131P52739 623 aa19.51■□□□□ 0.71
HLCS-205ENST00000448340 PTENP60484 403 aa19.51■□□□□ 0.71
HLCS-205ENST00000448340 FAM160A1Q05DH4 1040 aa19.51■□□□□ 0.71
HLCS-205ENST00000448340 FMR1NBQ8N0W7 255 aaPredicted RBP19.51■□□□□ 0.71
HLCS-205ENST00000448340 SEPT8Q92599 483 aa19.51■□□□□ 0.71
HLCS-205ENST00000448340 APBB2Q92870 758 aa19.51■□□□□ 0.71
HLCS-205ENST00000448340 IFIH1Q9BYX4 1025 aaKnown RBP19.51■□□□□ 0.71
HLCS-205ENST00000448340 NOC2LQ9Y3T9 749 aaKnown RBP19.51■□□□□ 0.71
HLCS-205ENST00000448340 EPOPA6NHQ4 379 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 LRRIQ4A6NIV6 560 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 SFI1A8K8P3 1242 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 RFXAPO00287 272 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 GPR182O15218 404 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 TBCAO75347 108 aaKnown RBP19.5■□□□□ 0.71
HLCS-205ENST00000448340 FAM13AO94988 1023 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 PLS3P13797 630 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 KCNQ1P51787 676 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 PEX3P56589 373 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 CACNB1Q02641 598 aaPredicted RBP19.5■□□□□ 0.71
HLCS-205ENST00000448340 PAK2Q13177 524 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 DMP1Q13316 513 aaPredicted RBP19.5■□□□□ 0.71
HLCS-205ENST00000448340 CDCA2Q69YH5 1023 aaPredicted RBP19.5■□□□□ 0.71
HLCS-205ENST00000448340 CNNM4Q6P4Q7 775 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 CNKSR3Q6P9H4 555 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 DYMQ7RTS9 669 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 ENGASEQ8NFI3 743 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 DBF4BQ8NFT6 615 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 STAMQ92783 540 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 DNAJC19Q96DA6 116 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 C7orf25Q9BPX7 421 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 TRIM9Q9C026 710 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 TSPYL2Q9H2G4 693 aaPredicted RBP19.5■□□□□ 0.71
HLCS-205ENST00000448340 LARSQ9P2J5 1176 aaKnown RBP19.5■□□□□ 0.71
HLCS-205ENST00000448340 PADI3Q9ULW8 664 aa19.5■□□□□ 0.71
HLCS-205ENST00000448340 ACTN1P12814 892 aa19.49■□□□□ 0.71
HLCS-205ENST00000448340 SFPQP23246 707 aaKnown RBP eCLIP19.49■□□□□ 0.71
HLCS-205ENST00000448340 CD52P31358 61 aa19.49■□□□□ 0.71
HLCS-205ENST00000448340 NPTX2P47972 431 aa19.49■□□□□ 0.71
HLCS-205ENST00000448340 SNW1Q13573 536 aaKnown RBP19.49■□□□□ 0.71
HLCS-205ENST00000448340 PCBP1Q15365 356 aaKnown RBP eCLIP19.49■□□□□ 0.71
HLCS-205ENST00000448340 KRBA2Q6ZNG9 492 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms