RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ARFIP2P53365 341 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 THEMIS2Q5TEJ8 643 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 GPBP1Q86WP2 473 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 ARHGAP45Q92619 1136 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 GPCPD1Q9NPB8 672 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 NOVA2Q9UNW9 492 aaKnown RBP9.46□□□□□ -0.89
NIPBL-202ENST00000448238 ERBINQ96RT1 1412 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 ZNF24P17028 368 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 MYL7Q01449 175 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 RDH13Q8NBN7 331 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 TESK2Q96S53 571 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 FAM167BQ9BTA0 163 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 TUBB1Q9H4B7 451 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 CXorf56Q9H5V9 222 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 ENOPH1Q9UHY7 261 aa9.46□□□□□ -0.89
NIPBL-202ENST00000448238 TUBA3CQ13748 450 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 MTFR1Q15390 333 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 C8orf4Q9NR00 106 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 MAD2L2Q9UI95 211 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 KCNA2P16389 499 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 STARP49675 285 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 PABPC4Q13310 644 aaKnown RBP eCLIP9.46□□□□□ -0.91e-6■■■□□ 16.1
NIPBL-202ENST00000448238 TCEAL5Q5H9L2 206 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 FAM160B1Q5W0V3 765 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 TTC30BQ8N4P2 665 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.46□□□□□ -0.9
NIPBL-202ENST00000448238 CLHC1Q8NHS4 586 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 ACAP3Q96P50 834 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 NEK6Q9HC98 313 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 POLR2FP61218 127 aaKnown RBP9.46□□□□□ -0.9
NIPBL-202ENST00000448238 ARF5P84085 180 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 RBBP7Q16576 425 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 SPANXN2Q5MJ10 180 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 TRIM17Q9Y577 477 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.9
NIPBL-202ENST00000448238 GCFC2P16383 781 aaKnown RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 ELF1P32519 619 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PSMD4P55036 377 aaKnown RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 GRSF1Q12849 480 aaKnown RBP eCLIP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 NAALADL2Q58DX5 795 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 BEND6Q5SZJ8 279 aaPredicted RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 DYMQ7RTS9 669 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 DDIASQ8IXT1 998 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PDCD6IPQ8WUM4 868 aaKnown RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 A0A0X1KG70 313 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 FOSL1P15407 271 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 TMEM154Q6P9G4 183 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 NRDE2Q9H7Z3 1164 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PPIP5K2O43314 1243 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 ACSL3O95573 720 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 EIF2B2P49770 351 aaKnown RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 SLC16A1P53985 500 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PSME3P61289 254 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 C6orf10Q5SRN2 563 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 TTC33Q6PID6 262 aaPredicted RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 LRRC31Q6UY01 552 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 CATSPER2Q96P56 530 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 SPATA16Q9BXB7 569 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 GHRP10912 638 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 YWHAQP27348 245 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 LRRC8DQ7L1W4 858 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 HEATR4Q86WZ0 1026 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 NMRK1Q9NWW6 199 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 SBNO2Q9Y2G9 1366 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 IL16Q14005 1332 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 ADGRA3Q8IWK6 1321 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 KANSL1LA0AUZ9 987 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 MSH3P20585 1137 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 HMOX2P30519 316 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 RSBN1Q5VWQ0 802 aaPredicted RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 NAA35Q5VZE5 725 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 TMEM132EQ6IEE7 984 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 CHURC1Q8WUH1 139 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 RBM41Q96IZ5 413 aaKnown RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 MLXIPQ9HAP2 919 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 SLC52A1Q9NWF4 448 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 ATP6V1HQ9UI12 483 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PCDHA5Q9Y5H7 936 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 ENO4A6NNW6 628 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 CCND1P24385 295 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 RRM2P31350 389 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 RHPN2Q8IUC4 686 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 FAF2Q96CS3 445 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 CD209Q9NNX6 404 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 KLHL3Q9UH77 587 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PITPNM2Q9BZ72 1349 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 FKBP9O95302 570 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 ZNF18P17022 549 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 RAD51Q06609 339 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 TPTE2Q6XPS3 522 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 FKBP9P1Q75LS8 142 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 NME9Q86XW9 330 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PALB2Q86YC2 1186 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 USHBP1Q8N6Y0 703 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 GLMNQ92990 594 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 THOC1Q96FV9 657 aaKnown RBP9.45□□□□□ -0.9
NIPBL-202ENST00000448238 PPP1R2P1Q96PQ5 205 aa9.45□□□□□ -0.9
NIPBL-202ENST00000448238 TGS1Q96RS0 853 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms