RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 NDUFV1P49821 464 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 ERVFC1P60507 584 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 ADAM15Q13444 863 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 NOSTRINQ8IVI9 506 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 FAM178BQ8IXR5 827 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 TRAIPQ9BWF2 469 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 TLE6Q9H808 572 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 UPF2Q9HAU5 1272 aaKnown RBP19.72■□□□□ 0.75
DDX56-207ENST00000448192 XPNPEP1Q9NQW7 623 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 AGPAT5Q9NUQ2 364 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 FAM105AQ9NUU6 356 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 PUF60Q9UHX1 559 aaKnown RBP19.72■□□□□ 0.75
DDX56-207ENST00000448192 FAM50BQ9Y247 325 aa19.72■□□□□ 0.75
DDX56-207ENST00000448192 ST18O60284 1047 aa19.71■□□□□ 0.75
DDX56-207ENST00000448192 TBX10O75333 385 aa19.71■□□□□ 0.75
DDX56-207ENST00000448192 RAB27AP51159 221 aa19.71■□□□□ 0.75
DDX56-207ENST00000448192 MXD4Q14582 209 aaPredicted RBP19.71■□□□□ 0.75
DDX56-207ENST00000448192 TTC38Q5R3I4 469 aa19.71■□□□□ 0.75
DDX56-207ENST00000448192 MRPS27Q92552 414 aaKnown RBP19.71■□□□□ 0.75
DDX56-207ENST00000448192 MRPL9Q9BYD2 267 aaKnown RBP19.71■□□□□ 0.75
DDX56-207ENST00000448192 NOL7Q9UMY1 257 aaKnown RBP19.71■□□□□ 0.75
DDX56-207ENST00000448192 DGAT1O75907 488 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 OR52Z1P0C646 297 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 SPATA31C1P0DKV0 1188 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 SSTR3P32745 418 aaPredicted RBP19.7■□□□□ 0.74
DDX56-207ENST00000448192 PPM1AP35813 382 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 RARRES1P49788 294 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 PLCB3Q01970 1234 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 KRT17Q04695 432 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 ORC2Q13416 577 aaPredicted RBP19.7■□□□□ 0.74
DDX56-207ENST00000448192 GLB1LQ6UWU2 654 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 CATSPER3Q86XQ3 398 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 EFHBQ8N7U6 833 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 CD320Q9NPF0 282 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 ENTPD7Q9NQZ7 604 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 SPG21Q9NZD8 308 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 LZTS1Q9Y250 596 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 INPP5FQ9Y2H2 1132 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 PCDHB2Q9Y5E7 798 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 C5orf42Q9H799 3197 aa19.7■□□□□ 0.74
DDX56-207ENST00000448192 MEIS3P2A8K0S8 358 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 PER2O15055 1255 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 ZNF623O75123 536 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 ERLIN2O94905 339 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 XRCC6P12956 609 aaKnown RBP eCLIP19.69■□□□□ 0.74
DDX56-207ENST00000448192 ALDH7A1P49419 539 aaKnown RBP19.69■□□□□ 0.74
DDX56-207ENST00000448192 TFDP1Q14186 410 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 PLPP4Q5VZY2 271 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 PDE12Q6L8Q7 609 aaKnown RBP19.69■□□□□ 0.74
DDX56-207ENST00000448192 GJD3Q8N144 294 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 ERMNQ8TAM6 284 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 ASAP3Q8TDY4 903 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 PGBD4Q96DM1 585 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 TUFT1Q9NNX1 390 aa19.69■□□□□ 0.74
DDX56-207ENST00000448192 NT5C1B-RDH14C9J2C7 533 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 INO80B-WBP1J3KQ70 363 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 USO1O60763 962 aaKnown RBP19.68■□□□□ 0.74
DDX56-207ENST00000448192 ZC3H11AO75152 810 aaKnown RBP eCLIP19.68■□□□□ 0.74
DDX56-207ENST00000448192 MED24O75448 989 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 HOXA11P31270 313 aaPredicted RBP19.68■□□□□ 0.74
DDX56-207ENST00000448192 ARL2P36404 184 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 TRAPPC10P48553 1259 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 BCAR1P56945 870 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 PTENP60484 403 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 RNASELQ05823 741 aaKnown RBP19.68■□□□□ 0.74
DDX56-207ENST00000448192 NBR1Q14596 966 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 NOMO2Q5JPE7 1267 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 MAEAQ7L5Y9 396 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 TCF25Q9BQ70 676 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 CD207Q9UJ71 328 aa19.68■□□□□ 0.74
DDX56-207ENST00000448192 FSCN2O14926 492 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 MBTPS2O43462 519 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 OFD1O75665 1012 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 NCBP1Q09161 790 aaKnown RBP19.67■□□□□ 0.74
DDX56-207ENST00000448192 CAPSQ13938 189 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 POTEGQ6S5H5 508 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 TMC7Q7Z402 723 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 SLC39A11Q8N1S5 342 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 RSPH1Q8WYR4 309 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 KHSRPQ92945 711 aaKnown RBP eCLIP19.67■□□□□ 0.74
DDX56-207ENST00000448192 NACC1Q96RE7 527 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 POLR3CQ9BUI4 534 aaPredicted RBP19.67■□□□□ 0.74
DDX56-207ENST00000448192 GBP3Q9H0R5 595 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 POLR3FQ9H1D9 316 aaPredicted RBP19.67■□□□□ 0.74
DDX56-207ENST00000448192 EPHX3Q9H6B9 360 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 TBC1D13Q9NVG8 400 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 CLEC1BQ9P126 229 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 KIF3AQ9Y496 699 aa19.67■□□□□ 0.74
DDX56-207ENST00000448192 TSPAN1O60635 241 aa19.66■□□□□ 0.74
DDX56-207ENST00000448192 GLP2RO95838 553 aa19.66■□□□□ 0.74
DDX56-207ENST00000448192 GLRA2P23416 452 aa19.66■□□□□ 0.74
DDX56-207ENST00000448192 U2AF2P26368 475 aaKnown RBP eCLIP19.66■□□□□ 0.74
DDX56-207ENST00000448192 RBM10P98175 930 aaKnown RBP19.66■□□□□ 0.74
DDX56-207ENST00000448192 SMAD4Q13485 552 aaKnown RBP19.66■□□□□ 0.74
DDX56-207ENST00000448192 SMAD2Q15796 467 aaKnown RBP19.66■□□□□ 0.74
DDX56-207ENST00000448192 DUSP6Q16828 381 aa19.66■□□□□ 0.74
DDX56-207ENST00000448192 UBXN11Q5T124 520 aa19.66■□□□□ 0.74
DDX56-207ENST00000448192 AGMOQ6ZNB7 445 aa19.66■□□□□ 0.74
DDX56-207ENST00000448192 MRPL10Q7Z7H8 261 aaKnown RBP19.66■□□□□ 0.74
DDX56-207ENST00000448192 URGCPQ8TCY9 931 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms