RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PRR33A8MZF0 331 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 NT5C1B-RDH14C9J2C7 533 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 SEC24BO95487 1268 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 KCNC3Q14003 757 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 EMC2Q15006 297 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 PSPC1Q8WXF1 523 aaKnown RBP20.35■□□□□ 0.85
COL9A1-205ENST00000447041 MINDY3Q9H8M7 445 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 AGPAT5Q9NUQ2 364 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 MUTYHQ9UIF7 546 aa20.35■□□□□ 0.85
COL9A1-205ENST00000447041 BTBD18B2RXH4 712 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 BAG4O95429 457 aaKnown RBP20.34■□□□□ 0.85
COL9A1-205ENST00000447041 PLA2G5P39877 138 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 RFC5P40937 340 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 BCAR1P56945 870 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 KRT17Q04695 432 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 LLGL2Q6P1M3 1020 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 TMC7Q7Z402 723 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 RNF135Q8IUD6 432 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 DIS3L2Q8IYB7 885 aaKnown RBP20.34■□□□□ 0.85
COL9A1-205ENST00000447041 PRPF31Q8WWY3 499 aaKnown RBP20.34■□□□□ 0.85
COL9A1-205ENST00000447041 ZSWIM4Q9H7M6 989 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 NGRNQ9NPE2 291 aaKnown RBP20.34■□□□□ 0.85
COL9A1-205ENST00000447041 PPME1Q9Y570 386 aa20.34■□□□□ 0.85
COL9A1-205ENST00000447041 FSD2A1L4K1 749 aa20.33■□□□□ 0.85
COL9A1-205ENST00000447041 ZC3H11AO75152 810 aaKnown RBP eCLIP20.33■□□□□ 0.85
COL9A1-205ENST00000447041 SRGAP2CP0DJJ0 459 aa20.33■□□□□ 0.85
COL9A1-205ENST00000447041 LAMTOR4Q0VGL1 99 aa20.33■□□□□ 0.85
COL9A1-205ENST00000447041 CALCRLQ16602 461 aa20.33■□□□□ 0.85
COL9A1-205ENST00000447041 XKR9Q5GH70 373 aa20.33■□□□□ 0.85
COL9A1-205ENST00000447041 TMEM173Q86WV6 379 aaPredicted RBP20.33■□□□□ 0.85
COL9A1-205ENST00000447041 TBC1D13Q9NVG8 400 aa20.33■□□□□ 0.85
COL9A1-205ENST00000447041 INPP5FQ9Y2H2 1132 aa20.33■□□□□ 0.85
COL9A1-205ENST00000447041 SLITRK3O94933 977 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 SKIP12755 728 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 TECP42680 631 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 RAB27AP51159 221 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 OTUD6AQ7L8S5 288 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 TPH2Q8IWU9 490 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 EXOC8Q8IYI6 725 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 RNF149Q8NC42 400 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 FAM122AQ96E09 287 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 MTRQ99707 1265 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 EIF2AK1Q9BQI3 630 aaKnown RBP20.32■□□□□ 0.84
COL9A1-205ENST00000447041 APOL5Q9BWW9 433 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 XPNPEP1Q9NQW7 623 aa20.32■□□□□ 0.84
COL9A1-205ENST00000447041 GAS2O43903 313 aaKnown RBP20.31■□□□□ 0.84
COL9A1-205ENST00000447041 NEMFO60524 1076 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 ZNF623O75123 536 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 OFD1O75665 1012 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 SRGAP2BP0DMP2 458 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 ALDH7A1P49419 539 aaKnown RBP20.31■□□□□ 0.84
COL9A1-205ENST00000447041 TRIM29Q14134 588 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 SMC1AQ14683 1233 aaKnown RBP20.31■□□□□ 0.84
COL9A1-205ENST00000447041 HERC4Q5GLZ8 1057 aaPredicted RBP20.31■□□□□ 0.84
COL9A1-205ENST00000447041 NOMO2Q5JPE7 1267 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 ANKRD54Q6NXT1 300 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 GLB1LQ6UWU2 654 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 TMEM184AQ6ZMB5 413 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 SRGAP1Q7Z6B7 1085 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 FERMT3Q86UX7 667 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 TCP11Q8WWU5 503 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 SUSD6Q92537 303 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 TMEM169Q96HH4 297 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 NRDE2Q9H7Z3 1164 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 TTC12Q9H892 705 aaPredicted RBP20.31■□□□□ 0.84
COL9A1-205ENST00000447041 PCDHA12Q9UN75 941 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 PCDHB2Q9Y5E7 798 aa20.31■□□□□ 0.84
COL9A1-205ENST00000447041 C2orf71A6NGG8 1288 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 LOC730098B7Z3J9 87 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 B4GALT3O60512 393 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 HOXA11P31270 313 aaPredicted RBP20.3■□□□□ 0.84
COL9A1-205ENST00000447041 CA8P35219 290 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 UBXN11Q5T124 520 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 SYCE2Q6PIF2 218 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 AGMOQ6ZNB7 445 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 BCL7CQ8WUZ0 217 aaPredicted RBP20.3■□□□□ 0.84
COL9A1-205ENST00000447041 RSPH1Q8WYR4 309 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 PHF7Q9BWX1 381 aaPredicted RBP20.3■□□□□ 0.84
COL9A1-205ENST00000447041 GBP3Q9H0R5 595 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 S1PR5Q9H228 398 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 DNAJB4Q9UDY4 337 aa20.3■□□□□ 0.84
COL9A1-205ENST00000447041 TXKP42681 527 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 AFF1P51825 1210 aaKnown RBP20.29■□□□□ 0.84
COL9A1-205ENST00000447041 GUCY1B3Q02153 619 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 VPS52Q8N1B4 723 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 MRPL43Q8N983 215 aaKnown RBP20.29■□□□□ 0.84
COL9A1-205ENST00000447041 AUTS2Q8WXX7 1259 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 PGBD4Q96DM1 585 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 RPGRIP1Q96KN7 1286 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 MTMR9Q96QG7 549 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 HSD17B14Q9BPX1 270 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 ZBP1Q9H171 429 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 CDH22Q9UJ99 828 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 HCFC2Q9Y5Z7 792 aa20.29■□□□□ 0.84
COL9A1-205ENST00000447041 POTEMA6NI47 508 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 ASAP2O43150 1006 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 LYPLA2O95372 231 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 GALTP07902 379 aa20.28■□□□□ 0.84
COL9A1-205ENST00000447041 RNASELQ05823 741 aaKnown RBP20.28■□□□□ 0.84
COL9A1-205ENST00000447041 CBX2Q14781 532 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms