RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TIAM2	Q8IVF5	1701 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	GH1	P01241	217 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	KCNJ2	P63252	427 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	BYSL	Q13895	437 aa	Known RBP	13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	PPM1K	Q8N3J5	372 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	SLC12A6	Q9UHW9	1150 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	PNMA3	Q9UL41	463 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	SPATA31A1	Q5TZJ5	1347 aa		13.53	□□□□□ -0.24
DDR1-238	ENST00000446312	GPR75-ASB3	A0A0A6YYF3	556 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	PMS2	P54278	862 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	SLC12A3	P55017	1021 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	PDIA5	Q14554	519 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	EAPP	Q56P03	285 aa	Predicted RBP	13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	XPO6	Q96QU8	1125 aa	Known RBP	13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	AIPL1	Q9NZN9	384 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	ALG6	Q9Y672	507 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	CASZ1	Q86V15	1759 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	SPATA31C1	P0DKV0	1188 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	PPP1R2	P41236	205 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	RANBP1	P43487	201 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	RPL21	P46778	160 aa	Known RBP	13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	SOX10	P56693	466 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	EPHA7	Q15375	998 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	RBM26	Q5T8P6	1007 aa	Known RBP	13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	CYP4F22	Q6NT55	531 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	JAML	Q86YT9	394 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	DHX38	Q92620	1227 aa	Known RBP	13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	NT5C3A	Q9H0P0	336 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	ASIC3	Q9UHC3	531 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	UST	Q9Y2C2	406 aa		13.52	□□□□□ -0.24
DDR1-238	ENST00000446312	LRP5	O75197	1615 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	DDTL	A6NHG4	134 aa	Predicted RBP	13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	MSH4	O15457	936 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	PRR5L	Q6MZQ0	368 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	ZDHHC14	Q8IZN3	488 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	MYH1	P12882	1939 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	MYH4	Q9Y623	1939 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	ASTN1	O14525	1302 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	SMCHD1	A6NHR9	2005 aa		13.52	□□□□□ -0.25
DDR1-238	ENST00000446312	GJB6	O95452	261 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	SHMT1	P34896	483 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	RPS6KA3	P51812	740 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	SYCP2L	Q5T4T6	812 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	NUGGC	Q68CJ6	796 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	FAM178B	Q8IXR5	827 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	PROM2	Q8N271	834 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	CHMP6	Q96FZ7	201 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	DNAJC5	Q9H3Z4	198 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	SIX2	Q9NPC8	291 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	TCP11X1	B4DZS4	312 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	CLDN3	O15551	220 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	PYGL	P06737	847 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	PREPL	Q4J6C6	727 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	ASPRV1	Q53RT3	343 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	TRIM68	Q6AZZ1	485 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	TTC27	Q6P3X3	843 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	BCOR	Q6W2J9	1755 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	ARHGEF19	Q8IW93	802 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	TBC1D16	Q8TBP0	767 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	PBK	Q96KB5	322 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	CEP63	Q96MT8	703 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	PI4K2A	Q9BTU6	479 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	GPRC5C	Q9NQ84	441 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	AGAP1	Q9UPQ3	857 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	COL14A1	Q05707	1796 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	GSTTP1	A0A1W2PQM5	241 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	CYP26A1	O43174	497 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	TGFB1I1	O43294	461 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	CALU	O43852	315 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	SPAG7	O75391	227 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	FSBP	O95073	299 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	COMT	P21964	271 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	ECE1	P42892	770 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	PSMC4	P43686	418 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	CCDC63	Q8NA47	563 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	CCDC197	Q8NCU1	140 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	LRRC27	Q9C0I9	530 aa		13.51	□□□□□ -0.25
DDR1-238	ENST00000446312	MYO3B	Q8WXR4	1341 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	UBOX5	O94941	541 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	PYGM	P11217	842 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	DRD4	P21917	467 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	ITIH3	Q06033	890 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	PHLDB3	Q6NSJ2	640 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	CDC42EP5	Q6NZY7	148 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	BARGIN	Q6ZT62	677 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	ATP8B4	Q8TF62	1192 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	ACSF2	Q96CM8	615 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	HAUS1	Q96CS2	278 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	C9orf72	Q96LT7	481 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	WDR91	A4D1P6	747 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312		H0Y3Z8	333 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	SGPL1	O95470	568 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	PPP4C	P60510	307 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	JAG1	P78504	1218 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	GRIK3	Q13003	919 aa		13.5	□□□□□ -0.25
DDR1-238	ENST00000446312	CUL1	Q13616	776 aa		13.5	□□□□□ -0.25

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