RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RAD54LQ92698 747 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 TMED8Q6PL24 325 aaPredicted RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 IGDCC4Q8TDY8 1250 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 LRRC10BA6NIK2 292 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 GIPC1O14908 333 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 TJP3O95049 919 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 SLC29A2Q14542 456 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 CCDC80Q76M96 950 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 PATL1Q86TB9 770 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 PCDHA12Q9UN75 941 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 DTNAQ9Y4J8 743 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 ATP6V1C1P21283 382 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 SOX5P35711 763 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 RFFLQ8WZ73 363 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 EYA3Q99504 573 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 NDNQ99608 321 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 FOXP3Q9BZS1 431 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 WHRNQ9P202 907 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 GAS7O60861 476 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 NT5DC1Q5TFE4 455 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 CCDC125Q86Z20 511 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 KIAA2013Q8IYS2 634 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 KCTD6Q8NC69 237 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 ZBTB21Q9ULJ3 1066 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 PNPLA6Q8IY17 1366 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 CLPTM1O96005 669 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 S100BP04271 92 aaPredicted RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 GUF1Q8N442 669 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 A1BGP04217 495 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 RFX6Q8HWS3 928 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 SIX6OS1Q8N1H7 587 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 GALNT4Q8N4A0 578 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 EIF1ADQ8N9N8 165 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 HEMGNQ9BXL5 484 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 KLHL25Q9H0H3 589 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 ADA2Q9NZK5 511 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 PRDM15P57071 1507 aaPredicted RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 CACNB1Q02641 598 aaPredicted RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 MCL1Q07820 350 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 GJA8P48165 433 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 PFKFB3Q16875 520 aaPredicted RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 METTL13Q8N6R0 699 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 TTC16Q8NEE8 873 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 ASCC3Q8N3C0 2202 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 PSMC2P35998 433 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 TGFBRAP1Q8WUH2 860 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 RBM15Q96T37 977 aaKnown RBP eCLIP8.38□□□□□ -1.071e-7■□□□□ 8.6
SMG1-202ENST00000446231 ZNF229Q9UJW7 825 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 DLATP10515 647 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 COASYQ13057 564 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 COQ7Q99807 217 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 MRPL40Q9NQ50 206 aaKnown RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 HEY2Q9UBP5 337 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 COMMD3-BMI1R4GMX3 469 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 FAM205CA6NFA0 338 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 WFS1O76024 890 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 KRT39Q6A163 491 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 TMC3Q7Z5M5 1100 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 ANKS1AQ92625 1134 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 STX18Q9P2W9 335 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 RNF103-CHMP3A0A140T963 221 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 PPP2R5DQ14738 602 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 BTNL9Q6UXG8 535 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 ARHGAP27Q6ZUM4 889 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 RDH13Q8NBN7 331 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 ALKBH8Q96BT7 664 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 DENND4BO75064 1496 aaPredicted RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 ITIH2P19823 946 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 LACTB2Q53H82 288 aaPredicted RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 ENAHQ8N8S7 591 aaPredicted RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 DDX18Q9NVP1 670 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 LZTS1Q9Y250 596 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 NEDD4P46934 1319 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 SNX16P57768 344 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 GPR141Q7Z602 305 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 ZFRQ96KR1 1074 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 UNC45AQ9H3U1 944 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 MAP4P27816 1152 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 TOB1P50616 345 aaPredicted RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 TEDDM1Q5T9Z0 273 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 ERGIC2Q96RQ1 377 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 A0A0U1RQJ8 604 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 KRT8P05787 483 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 ARL1P40616 181 aaPredicted RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 IZUMO3Q5VZ72 239 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 LENG1Q96BZ8 264 aaPredicted RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 DGCR14Q96DF8 476 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 ING2Q9H160 280 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 KDM5AP29375 1690 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 MTTPP55157 894 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 P3H1Q32P28 736 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 KLC3Q6P597 504 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 C1orf131Q8NDD1 294 aaKnown RBP8.37□□□□□ -1.07
SMG1-202ENST00000446231 SLC13A1Q9BZW2 595 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 CCDC134Q9H6E4 229 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
SMG1-202ENST00000446231 PTK2Q05397 1052 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms