RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 RFX6Q8HWS3 928 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 KIAA0895Q8NCT3 520 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 RMDN3Q96TC7 470 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 TRIM6Q9C030 488 aaPredicted RBP17.83■□□□□ 0.45
TCOF1-206ENST00000445265 HESX1Q9UBX0 185 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 GINS2Q9Y248 185 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 RINT1Q6NUQ1 792 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 CATSPER3Q86XQ3 398 aa17.83■□□□□ 0.45
TCOF1-206ENST00000445265 RTFDC1Q9BY42 306 aaPredicted RBP17.83■□□□□ 0.45
TCOF1-206ENST00000445265 DENND3A2RUS2 1198 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 GOLGA8SH3BPF8 625 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 RGL2O15211 777 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 TFDP1Q14186 410 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 TAB3Q8N5C8 712 aaPredicted RBP17.83■□□□□ 0.44
TCOF1-206ENST00000445265 ANKRD36BP1Q96IX9 119 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 PSMC5P62195 406 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 PRKG1Q13976 671 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 SURF1Q15526 300 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 TRIM59Q8IWR1 403 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 FBXL13Q8NEE6 735 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 PITPNM3Q9BZ71 974 aa17.83■□□□□ 0.44
TCOF1-206ENST00000445265 MCF2LO15068 1137 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 MAP7D1Q3KQU3 841 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 POLR3CQ9BUI4 534 aaPredicted RBP17.82■□□□□ 0.44
TCOF1-206ENST00000445265 LCMT1Q9UIC8 334 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 COMMD10Q9Y6G5 202 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 MED7O43513 233 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 AGTP01019 485 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 YARSP54577 528 aaKnown RBP17.82■□□□□ 0.44
TCOF1-206ENST00000445265 RASA3Q14644 834 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 TRIM42Q8IWZ5 723 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 MYBL1P10243 752 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 VPS72Q15906 364 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 SDCCAG8Q86SQ7 713 aaPredicted RBP17.82■□□□□ 0.44
TCOF1-206ENST00000445265 ADPGKQ9BRR6 497 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 MSTO1Q9BUK6 570 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 TIPINQ9BVW5 301 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 PHF2O75151 1096 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 SPARCL1Q14515 664 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 EXOC8Q8IYI6 725 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 TRIM51Q9BSJ1 452 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 UVRAGQ9P2Y5 699 aa17.82■□□□□ 0.44
TCOF1-206ENST00000445265 CCDC160A6NGH7 325 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 PDIK1LQ8N165 341 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 PRPF38AQ8NAV1 312 aaKnown RBP17.81■□□□□ 0.44
TCOF1-206ENST00000445265 TPCN2Q8NHX9 752 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 ATP6V0A4Q9HBG4 840 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 TFAMQ00059 246 aaKnown RBP17.81■□□□□ 0.44
TCOF1-206ENST00000445265 STRIP1Q5VSL9 837 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 PPP4R1Q8TF05 950 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 TTC25Q96NG3 672 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 CARD9Q9H257 536 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 RASA4BC9J798 803 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 RASA4O43374 803 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 MT-ND3P03897 115 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 RPSAP08865 295 aaKnown RBP17.81■□□□□ 0.44
TCOF1-206ENST00000445265 KDM7AQ6ZMT4 941 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 LDHDQ86WU2 507 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 TMEM139Q8IV31 216 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 TUBB6Q9BUF5 446 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 HEMGNQ9BXL5 484 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 SAYSD1Q9NPB0 183 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 MAPK13O15264 365 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 ZNF354CQ86Y25 554 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 CAVIN3Q969G5 261 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 SNF8Q96H20 258 aa17.81■□□□□ 0.44
TCOF1-206ENST00000445265 FOXP2O15409 715 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 FAM107AO95990 144 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 BRAFP15056 766 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 MSL3Q8N5Y2 521 aaKnown RBP17.8■□□□□ 0.44
TCOF1-206ENST00000445265 PYROXD1Q8WU10 500 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 PRR12Q9ULL5 1215 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 ZBTB22O15209 634 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 TRIM68Q6AZZ1 485 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 TRIM72Q6ZMU5 477 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 SRRM1Q8IYB3 904 aaKnown RBP17.8■□□□□ 0.44
TCOF1-206ENST00000445265 RTKN2Q8IZC4 609 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 TMEM35BQ8NCS4 154 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 CASKIN2Q8WXE0 1202 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 C11orf70Q9BRQ4 267 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 FAM213AQ9BRX8 229 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 CSADQ9Y600 493 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 IVNS1ABPQ9Y6Y0 642 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 ENTPD3O75355 529 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 DDX42Q86XP3 938 aaKnown RBP eCLIP17.8■□□□□ 0.44
TCOF1-206ENST00000445265 RHOT1Q8IXI2 618 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 SLC4A9Q96Q91 983 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 ERP44Q9BS26 406 aa17.8■□□□□ 0.44
TCOF1-206ENST00000445265 DYNLT1P63172 113 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 ERICH1Q86X53 443 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 ZNF507Q8TCN5 953 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 IFT122Q9HBG6 1241 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 INO80B-WBP1J3KQ70 363 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 CD58P19256 250 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 PON1P27169 355 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 BASP1P80723 227 aaKnown RBP17.79■□□□□ 0.44
TCOF1-206ENST00000445265 PTGISQ16647 500 aa17.79■□□□□ 0.44
TCOF1-206ENST00000445265 SPATA24Q86W54 205 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms