RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 LINC01553A4QN01 128 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 CUTAO60888 179 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 HIP1RO75146 1068 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 DGKIO75912 1065 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 SKIP12755 728 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 NCLP19338 710 aaKnown RBP19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 GUCY2CP25092 1073 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 ME1P48163 572 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 SLC12A3P55017 1021 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 FAM189BP81408 668 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 GRIN2CQ14957 1233 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 RRAGBQ5VZM2 374 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 CDCA2Q69YH5 1023 aaPredicted RBP19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 CRIPAKQ8N1N5 446 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 BSNDQ8WZ55 320 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 LARP4BQ92615 738 aaKnown RBP19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 RAD54LQ92698 747 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 ELAC1Q9H777 363 aaKnown RBP19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 POLD4Q9HCU8 107 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 COL4A6Q14031 1691 aa19.3■□□□□ 0.68
SMARCAL1-209ENST00000444508 A0A0U1RQF3 1178 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 ARHGEF15O94989 841 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 AXLP30530 894 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 RAB27AP51159 221 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 KRT85P78386 507 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 NUCB2P80303 420 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 RAD51AP2Q09MP3 1159 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 DMP1Q13316 513 aaPredicted RBP19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 BTG3Q14201 252 aaPredicted RBP19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 DHX8Q14562 1220 aaKnown RBP19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 CCDC73Q6ZRK6 1079 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 GPBP1Q86WP2 473 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 ECHDC2Q86YB7 292 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 FIBCD1Q8N539 461 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 RNF169Q8NCN4 708 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 GUCD1Q96NT3 240 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 TGS1Q96RS0 853 aaKnown RBP19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 CDX2Q99626 313 aaPredicted RBP19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 CERS4Q9HA82 394 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 BLOC1S4Q9NUP1 217 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 PRMT7Q9NVM4 692 aaPredicted RBP19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 STK17AQ9UEE5 414 aa19.29■□□□□ 0.68
SMARCAL1-209ENST00000444508 HOXA2O43364 376 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 TSPAN1O60635 241 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 EOMESO95936 686 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 KRT18P05783 430 aaKnown RBP19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 DDIT3P35638 169 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 ANP32AP39687 249 aaKnown RBP19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 MCM6Q14566 821 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 NOTUMQ6P988 496 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 CMTR2Q8IYT2 770 aaKnown RBP19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 ARNTL2Q8WYA1 636 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 ZNF689Q96CS4 500 aaPredicted RBP19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 CCDC51Q96ER9 411 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 TRAIPQ9BWF2 469 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 PRDM12Q9H4Q4 367 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 C17orf75Q9HAS0 396 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 RC3H2Q9HBD1 1191 aaKnown RBP19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 KCNG1Q9UIX4 513 aa19.28■□□□□ 0.68
SMARCAL1-209ENST00000444508 CCDC169A6NNP5 214 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 HOXA11P31270 313 aaPredicted RBP19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 STAT6P42226 847 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 EFNA5P52803 228 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 PEX3P56589 373 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 MAPK6Q16659 721 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 AMHR2Q16671 573 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 TMEM132AQ24JP5 1023 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 PAN2Q504Q3 1202 aaKnown RBP19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 PPP4R3CPQ6ZMV5 832 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 ABI1Q8IZP0 508 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 DAW1Q8N136 415 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 LRRC15Q8TF66 581 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 PRIMPOLQ96LW4 560 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 SAMD11Q96NU1 681 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 GAS2L1Q99501 681 aaPredicted RBP19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 FAM105AQ9NUU6 356 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 RCOR1Q9UKL0 485 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 MTUS1Q9ULD2 1270 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 MYO9BQ13459 2157 aa19.27■□□□□ 0.68
SMARCAL1-209ENST00000444508 TBKBP1A7MCY6 615 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 PRKCBP05771 671 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 LIG1P18858 919 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 NPTX2P47972 431 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 ERVK-21P61565 698 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 MAPK7Q13164 816 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 ARSHQ5FYA8 562 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 MYLIPQ8WY64 445 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 CPB2Q96IY4 423 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 SPATA32Q96LK8 384 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 KIFC3Q9BVG8 833 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 PANK2Q9BZ23 570 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 FZD8Q9H461 694 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 KMT5AQ9NQR1 393 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 CHD7Q9P2D1 2997 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 ODF2LQ9ULJ1 636 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 PCDHA7Q9UN72 937 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 RWDD3Q9Y3V2 267 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 MYH11P35749 1972 aa19.26■□□□□ 0.67
SMARCAL1-209ENST00000444508 PHLPP2Q6ZVD8 1323 aa19.25■□□□□ 0.67
SMARCAL1-209ENST00000444508 NPHP3-ACAD11A0A0J9YXS1 232 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms