RNA–Protein interactions for RNA: ENST00000443790.1

EDEM1-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 2

Gene EDEM1, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-203ENST00000443790 NPEPPSP55786 919 aa22.25■■□□□ 1.15
EDEM1-203ENST00000443790 LONRF3Q496Y0 759 aa22.25■■□□□ 1.15
EDEM1-203ENST00000443790 TPRNQ4KMQ1 711 aa22.25■■□□□ 1.15
EDEM1-203ENST00000443790 GLB1LQ6UWU2 654 aa22.25■■□□□ 1.15
EDEM1-203ENST00000443790 TMEM173Q86WV6 379 aaPredicted RBP22.25■■□□□ 1.15
EDEM1-203ENST00000443790 SLC7A3Q8WY07 619 aa22.25■■□□□ 1.15
EDEM1-203ENST00000443790 IFT122Q9HBG6 1241 aa22.25■■□□□ 1.15
EDEM1-203ENST00000443790 TBC1D13Q9NVG8 400 aa22.25■■□□□ 1.15
EDEM1-203ENST00000443790 CARNS1A5YM72 827 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 MEIS3P2A8K0S8 358 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 CLASP2O75122 1294 aaKnown RBP22.24■■□□□ 1.15
EDEM1-203ENST00000443790 ZNF623O75123 536 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 SIGLEC14Q08ET2 396 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 BMS1Q14692 1282 aaKnown RBP22.24■■□□□ 1.15
EDEM1-203ENST00000443790 PTPN21Q16825 1174 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 NOMO2Q5JPE7 1267 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 VPS52Q8N1B4 723 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 ZBP1Q9H171 429 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 SLKQ9H2G2 1235 aaPredicted RBP22.24■■□□□ 1.15
EDEM1-203ENST00000443790 AGPAT5Q9NUQ2 364 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 WRAP73Q9P2S5 460 aaPredicted RBP22.24■■□□□ 1.15
EDEM1-203ENST00000443790 CDH22Q9UJ99 828 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 PPME1Q9Y570 386 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 COL4A3BPQ9Y5P4 624 aa22.24■■□□□ 1.15
EDEM1-203ENST00000443790 TBX3O15119 743 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 P4HBP07237 508 aaKnown RBP22.23■■□□□ 1.15
EDEM1-203ENST00000443790 XBP1P17861 261 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 CA8P35219 290 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 POLGP54098 1239 aaPredicted RBP22.23■■□□□ 1.15
EDEM1-203ENST00000443790 ZNF579Q8NAF0 562 aaKnown RBP22.23■■□□□ 1.15
EDEM1-203ENST00000443790 HAS1Q92839 578 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 IGSF21Q96ID5 467 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 CEP170P1Q96L14 293 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 DHX33Q9H6R0 707 aaKnown RBP22.23■■□□□ 1.15
EDEM1-203ENST00000443790 NRDE2Q9H7Z3 1164 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 GJB4Q9NTQ9 266 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 INPP5FQ9Y2H2 1132 aa22.23■■□□□ 1.15
EDEM1-203ENST00000443790 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 CCNT1O60563 726 aaKnown RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 PFKFB2O60825 505 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 OFD1O75665 1012 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 CXCL14O95715 111 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 SP100P23497 879 aaPredicted RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 MRE11P49959 708 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 ITIH3Q06033 890 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 CES5AQ6NT32 575 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 PIK3AP1Q6ZUJ8 805 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 DDX53Q86TM3 631 aaKnown RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 SUGP1Q8IWZ8 645 aaKnown RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 EXOC8Q8IYI6 725 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 OXER1Q8TDS5 423 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 BCL7CQ8WUZ0 217 aaPredicted RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 PSPC1Q8WXF1 523 aaKnown RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 AUTS2Q8WXX7 1259 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 NAP1L4Q99733 375 aaKnown RBP22.22■■□□□ 1.15
EDEM1-203ENST00000443790 LXNQ9BS40 222 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 ADAM7Q9H2U9 754 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 TPCN1Q9ULQ1 816 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 IRAK3Q9Y616 596 aa22.22■■□□□ 1.15
EDEM1-203ENST00000443790 GALTP07902 379 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 CTSAP10619 480 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 RFC5P40937 340 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 RNASELQ05823 741 aaKnown RBP22.21■■□□□ 1.15
EDEM1-203ENST00000443790 EPHA7Q15375 998 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 POTEDQ86YR6 584 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 C4orf19Q8IY42 314 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 FBXL6Q8N531 539 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 PRPF31Q8WWY3 499 aaKnown RBP22.21■■□□□ 1.15
EDEM1-203ENST00000443790 TMEM143Q96AN5 459 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 PGBD4Q96DM1 585 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 ASIC4Q96FT7 647 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 NECTIN4Q96NY8 510 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 POMKQ9H5K3 350 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 DNAJB4Q9UDY4 337 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 NR2E1Q9Y466 385 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 PCDHB2Q9Y5E7 798 aa22.21■■□□□ 1.15
EDEM1-203ENST00000443790 DTNBO60941 627 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 YWHABP31946 246 aaKnown RBP22.2■■□□□ 1.14
EDEM1-203ENST00000443790 ANAPC15P60006 121 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 GIT2Q14161 759 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 SRGAP1Q7Z6B7 1085 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 PRSS33Q8NF86 280 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 GBP3Q9H0R5 595 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 MINDY3Q9H8M7 445 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 TSHZ2Q9NRE2 1034 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 BMP2KQ9NSY1 1161 aaPredicted RBP22.2■■□□□ 1.14
EDEM1-203ENST00000443790 DZANK1Q9NVP4 752 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 KMT2EQ8IZD2 1858 aa22.2■■□□□ 1.14
EDEM1-203ENST00000443790 GAS2O43903 313 aaKnown RBP22.19■■□□□ 1.14
EDEM1-203ENST00000443790 B4GALT3O60512 393 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 CTDNEP1O95476 244 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 SRGAP2CP0DJJ0 459 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 SLC11A1P49279 550 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 SPIRE1Q08AE8 756 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 LAMTOR4Q0VGL1 99 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 EMC2Q15006 297 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 EARS2Q5JPH6 523 aaKnown RBP22.19■■□□□ 1.14
EDEM1-203ENST00000443790 IER5LQ5T953 404 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 NCAPH2Q6IBW4 605 aa22.19■■□□□ 1.14
EDEM1-203ENST00000443790 AGMOQ6ZNB7 445 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms