RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 FAM105AQ9NUU6 356 aa14.57□□□□□ -0.08
TOM1-208ENST00000443206 KIAA1024Q9UPX6 916 aa14.57□□□□□ -0.08
TOM1-208ENST00000443206 CUL9Q8IWT3 2517 aa14.57□□□□□ -0.08
TOM1-208ENST00000443206 TCF20Q9UGU0 1960 aaKnown RBP14.56□□□□□ -0.08
TOM1-208ENST00000443206 VPS37CA5D8V6 355 aaPredicted RBP14.56□□□□□ -0.08
TOM1-208ENST00000443206 ITGB1P05556 798 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 LAG3P18627 525 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 AXLP30530 894 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 ATP2C1P98194 919 aaPredicted RBP14.56□□□□□ -0.08
TOM1-208ENST00000443206 CAPSQ13938 189 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 PADI6Q6TGC4 694 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 BRAPQ7Z569 592 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 IFNLR1Q8IU57 520 aaPredicted RBP14.56□□□□□ -0.08
TOM1-208ENST00000443206 HELQQ8TDG4 1101 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 ASAP3Q8TDY4 903 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 RSPH1Q8WYR4 309 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 PGBD4Q96DM1 585 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 INTS4Q96HW7 963 aaKnown RBP14.56□□□□□ -0.08
TOM1-208ENST00000443206 NSUN3Q9H649 340 aaKnown RBP14.56□□□□□ -0.08
TOM1-208ENST00000443206 DDX19AQ9NUU7 478 aaKnown RBP14.56□□□□□ -0.08
TOM1-208ENST00000443206 DNM3Q9UQ16 869 aa14.56□□□□□ -0.08
TOM1-208ENST00000443206 PLXNA4Q9HCM2 1894 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 LRRIQ4A6NIV6 560 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 K7ELQ4 463 aaPredicted RBP14.55□□□□□ -0.08
TOM1-208ENST00000443206 ZNF623O75123 536 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 ATF7P17544 494 aaPredicted RBP14.55□□□□□ -0.08
TOM1-208ENST00000443206 CYP11B2P19099 503 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 GLRA2P23416 452 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 ECM1Q16610 540 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 ARL6IP4Q66PJ3 421 aaKnown RBP14.55□□□□□ -0.08
TOM1-208ENST00000443206 THNSL1Q8IYQ7 743 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 LRRC43Q8N309 656 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 COLGALT1Q8NBJ5 622 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 SPPL3Q8TCT6 385 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 COL25A1Q9BXS0 654 aaPredicted RBP14.55□□□□□ -0.08
TOM1-208ENST00000443206 MRPL9Q9BYD2 267 aaKnown RBP14.55□□□□□ -0.08
TOM1-208ENST00000443206 NFKBIZQ9BYH8 718 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 BHMT2Q9H2M3 363 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 CWH43Q9H720 699 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 GPRC5CQ9NQ84 441 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 RNF19AQ9NV58 838 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 NCOR1O75376 2440 aa14.55□□□□□ -0.08
TOM1-208ENST00000443206 ATG2AQ2TAZ0 1938 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 VWA3AA6NCI4 1184 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 NCK2O43639 380 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 BMP15O95972 392 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 CDC25AP30304 524 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 HOXA11P31270 313 aaPredicted RBP14.54□□□□□ -0.08
TOM1-208ENST00000443206 TFF2Q03403 129 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 UBE3AQ05086 875 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 IL17AQ16552 155 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 LONRF3Q496Y0 759 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 TCEAL5Q5H9L2 206 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 CLLU1OSQ5K130 101 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 NOTUMQ6P988 496 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 GLB1LQ6UWU2 654 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 LRRC55Q6ZSA7 311 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 ZBTB8OSQ8IWT0 167 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 CNNM3Q8NE01 707 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 POF1BQ8WVV4 589 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 LPPQ93052 612 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 PPP2R3CQ969Q6 453 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 PCDHB2Q9Y5E7 798 aa14.54□□□□□ -0.08
TOM1-208ENST00000443206 MYH11P35749 1972 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 PP2D1A8MPX8 630 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 TSPAN1O60635 241 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 FGF18O76093 207 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 CSPG5O95196 566 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 EYA4O95677 639 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 PPM1AP35813 382 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 MBTD1Q05BQ5 628 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 PPP2R5AQ15172 486 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 ZRSR1Q15695 479 aaKnown RBP14.53□□□□□ -0.08
TOM1-208ENST00000443206 KCNT2Q6UVM3 1135 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 EP400NLQ6ZTU2 488 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 MRPL10Q7Z7H8 261 aaKnown RBP14.53□□□□□ -0.08
TOM1-208ENST00000443206 MICAL1Q8TDZ2 1067 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 CCDC51Q96ER9 411 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 IFT74Q96LB3 600 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 ZNF558Q96NG5 402 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 NT5C3AQ9H0P0 336 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 C2orf40Q9H1Z8 148 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 UBE2ZQ9H832 354 aaPredicted RBP14.53□□□□□ -0.08
TOM1-208ENST00000443206 PRMT7Q9NVM4 692 aaPredicted RBP14.53□□□□□ -0.08
TOM1-208ENST00000443206 HCSTQ9UBK5 93 aa14.53□□□□□ -0.08
TOM1-208ENST00000443206 PUF60Q9UHX1 559 aaKnown RBP14.53□□□□□ -0.08
TOM1-208ENST00000443206 VCANP13611 3396 aa14.52□□□□□ -0.08
TOM1-208ENST00000443206 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.52□□□□□ -0.09
TOM1-208ENST00000443206 CARNS1A5YM72 827 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 E9PMD0 336 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 SYT1P21579 422 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 NAMPTP43490 491 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 ALDH7A1P49419 539 aaKnown RBP14.52□□□□□ -0.09
TOM1-208ENST00000443206 KRT17Q04695 432 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 RNASELQ05823 741 aaKnown RBP14.52□□□□□ -0.09
TOM1-208ENST00000443206 CAMK1Q14012 370 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 NOMO2Q5JPE7 1267 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 KCTD17Q8N5Z5 321 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 DEPTORQ8TB45 409 aa14.52□□□□□ -0.09
TOM1-208ENST00000443206 URGCPQ8TCY9 931 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms