RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 RALGAPA2Q2PPJ7 1873 aa23.39■■□□□ 1.34
CDKN3-204ENST00000442975 LAD1O00515 517 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 EOMESO95936 686 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 SKIP12755 728 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 GLRA2P23416 452 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 ARL2P36404 184 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 RAB27AP51159 221 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 MCPH1Q8NEM0 835 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 ADAMTS19Q8TE59 1207 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 POF1BQ8WVV4 589 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 INPP5FQ9Y2H2 1132 aa23.39■■□□□ 1.33
CDKN3-204ENST00000442975 VPS37CA5D8V6 355 aaPredicted RBP23.38■■□□□ 1.33
CDKN3-204ENST00000442975 LRRIQ4A6NIV6 560 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 PP2D1A8MPX8 630 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 KCNA5P22460 613 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 DNAJB1P25685 340 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 PBX3P40426 434 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 PTENP60484 403 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 PADI6Q6TGC4 694 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 DTHD1Q6ZMT9 781 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 SPPL3Q8TCT6 385 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 CWH43Q9H720 699 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 KIAA1024Q9UPX6 916 aa23.38■■□□□ 1.33
CDKN3-204ENST00000442975 TSPAN1O60635 241 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 FGF18O76093 207 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 CUL4AQ13619 759 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 ZRSR1Q15695 479 aaKnown RBP23.37■■□□□ 1.33
CDKN3-204ENST00000442975 ECM1Q16610 540 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 KRT79Q5XKE5 535 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 GLB1LQ6UWU2 654 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 LRRC55Q6ZSA7 311 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 IGSF22Q8N9C0 903 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 ZNF558Q96NG5 402 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 TRAIPQ9BWF2 469 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 MRPL9Q9BYD2 267 aaKnown RBP23.37■■□□□ 1.33
CDKN3-204ENST00000442975 DDX19AQ9NUU7 478 aaKnown RBP23.37■■□□□ 1.33
CDKN3-204ENST00000442975 PCDHB2Q9Y5E7 798 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 TTC28Q96AY4 2481 aa23.37■■□□□ 1.33
CDKN3-204ENST00000442975 NLRC5Q86WI3 1866 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 ARID2Q68CP9 1835 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 IRS1P35568 1242 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 PRPHP41219 470 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 ATP2C1P98194 919 aaPredicted RBP23.36■■□□□ 1.33
CDKN3-204ENST00000442975 MBTD1Q05BQ5 628 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 IL17AQ16552 155 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 CSPP1Q1MSJ5 1256 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 CPB2Q96IY4 423 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 UHRF1Q96T88 793 aaPredicted RBP23.36■■□□□ 1.33
CDKN3-204ENST00000442975 BHMT2Q9H2M3 363 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 STK24Q9Y6E0 443 aa23.36■■□□□ 1.33
CDKN3-204ENST00000442975 MEIS3P2A8K0S8 358 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 MUTP22033 750 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 CDC25AP30304 524 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 HOXA11P31270 313 aaPredicted RBP23.35■■□□□ 1.33
CDKN3-204ENST00000442975 NCBP1Q09161 790 aaKnown RBP23.35■■□□□ 1.33
CDKN3-204ENST00000442975 CAMK1Q14012 370 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 PDIA5Q14554 519 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 NOTUMQ6P988 496 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 KCNT2Q6UVM3 1135 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 PPP2R3CQ969Q6 453 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 PGBD4Q96DM1 585 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 CLDND1Q9NY35 253 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 PCDHGC5Q9Y5F6 944 aa23.35■■□□□ 1.33
CDKN3-204ENST00000442975 H3BQ06 376 aaPredicted RBP23.34■■□□□ 1.33
CDKN3-204ENST00000442975 CYP11B2P19099 503 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 HYAL1Q12794 435 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 PCBP1Q15365 356 aaKnown RBP eCLIP23.34■■□□□ 1.33
CDKN3-204ENST00000442975 UBXN11Q5T124 520 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 IFNLR1Q8IU57 520 aaPredicted RBP23.34■■□□□ 1.33
CDKN3-204ENST00000442975 ZBTB8OSQ8IWT0 167 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 MICAL1Q8TDZ2 1067 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 NECAB3Q96P71 396 aaPredicted RBP23.34■■□□□ 1.33
CDKN3-204ENST00000442975 IGFLR1Q9H665 355 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 TLR9Q9NR96 1032 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 FOXD4L1Q9NU39 408 aa23.34■■□□□ 1.33
CDKN3-204ENST00000442975 VWA3AA6NCI4 1184 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 B4GALT5O43286 388 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 ZC3H11AO75152 810 aaKnown RBP eCLIP23.33■■□□□ 1.33
CDKN3-204ENST00000442975 PDCP20941 246 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 PPM1AP35813 382 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 UBE3AQ05086 875 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 RNASELQ05823 741 aaKnown RBP23.33■■□□□ 1.33
CDKN3-204ENST00000442975 POU5F1BQ06416 359 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 NOMO2Q5JPE7 1267 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 PABPC5Q96DU9 382 aaKnown RBP23.33■■□□□ 1.33
CDKN3-204ENST00000442975 CCDC51Q96ER9 411 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 EIF2AQ9BY44 585 aaKnown RBP23.33■■□□□ 1.33
CDKN3-204ENST00000442975 NFKBIZQ9BYH8 718 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 GBP3Q9H0R5 595 aa23.33■■□□□ 1.33
CDKN3-204ENST00000442975 KIAA1671Q9BY89 1806 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 ZNF623O75123 536 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 BMP1P13497 986 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 LIG1P18858 919 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 AXLP30530 894 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 AMHR2Q16671 573 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 BRAPQ7Z569 592 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 ADGRD2Q7Z7M1 963 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 URGCPQ8TCY9 931 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 BSNDQ8WZ55 320 aa23.32■■□□□ 1.32
CDKN3-204ENST00000442975 TRIM6Q9C030 488 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms