RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 COLGALT1Q8NBJ5 622 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 SPPL3Q8TCT6 385 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 UBE2ZQ9H832 354 aaPredicted RBP24.6■■□□□ 1.53
HDLBP-220ENST00000442730 FAM105AQ9NUU6 356 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 MUC3AQ02505 3323 aa24.6■■□□□ 1.53
HDLBP-220ENST00000442730 CSPG5O95196 566 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 MUTP22033 750 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 HOXA11P31270 313 aaPredicted RBP24.59■■□□□ 1.53
HDLBP-220ENST00000442730 CCT6AP40227 531 aaKnown RBP24.59■■□□□ 1.53
HDLBP-220ENST00000442730 PRPHP41219 470 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 RAB27AP51159 221 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 POU5F1BQ06416 359 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 PDIA5Q14554 519 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 COL19A1Q14993 1142 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 ECM1Q16610 540 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 LARP1BQ659C4 914 aaKnown RBP24.59■■□□□ 1.53
HDLBP-220ENST00000442730 IFNLR1Q8IU57 520 aaPredicted RBP24.59■■□□□ 1.53
HDLBP-220ENST00000442730 MCPH1Q8NEM0 835 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 HELQQ8TDG4 1101 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 GPRC5CQ9NQ84 441 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 AAASQ9NRG9 546 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 PCDHB12Q9Y5F1 795 aa24.59■■□□□ 1.53
HDLBP-220ENST00000442730 SKIP12755 728 aa24.58■■□□□ 1.53
HDLBP-220ENST00000442730 LAG3P18627 525 aa24.58■■□□□ 1.53
HDLBP-220ENST00000442730 ATP2C1P98194 919 aaPredicted RBP24.58■■□□□ 1.53
HDLBP-220ENST00000442730 MBTD1Q05BQ5 628 aa24.58■■□□□ 1.53
HDLBP-220ENST00000442730 PCBP1Q15365 356 aaKnown RBP eCLIP24.58■■□□□ 1.534e-7■■■■□ 21.3
HDLBP-220ENST00000442730 ADAMTS19Q8TE59 1207 aa24.58■■□□□ 1.53
HDLBP-220ENST00000442730 NFKBIZQ9BYH8 718 aa24.58■■□□□ 1.53
HDLBP-220ENST00000442730 RAB34Q9BZG1 259 aa24.58■■□□□ 1.53
HDLBP-220ENST00000442730 MYO7AQ13402 2215 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.57■■□□□ 1.52
HDLBP-220ENST00000442730 ARHGEF35A5YM69 484 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 TSPAN1O60635 241 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 ZNF623O75123 536 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 CSPP1Q1MSJ5 1256 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 UBXN11Q5T124 520 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 PADI6Q6TGC4 694 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 SNX29Q8TEQ0 813 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 POF1BQ8WVV4 589 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 LPPQ93052 612 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 PCDHB2Q9Y5E7 798 aa24.57■■□□□ 1.52
HDLBP-220ENST00000442730 BDP1A6H8Y1 2624 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 PLXNA4Q9HCM2 1894 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 MEIS3P2A8K0S8 358 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 PP2D1A8MPX8 630 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 INO80B-WBP1J3KQ70 363 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 FGF18O76093 207 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 ERLIN2O94905 339 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 BMP1P13497 986 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 LONRF3Q496Y0 759 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 DTHD1Q6ZMT9 781 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 MAEAQ7L5Y9 396 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 THNSL1Q8IYQ7 743 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 MRPL9Q9BYD2 267 aaKnown RBP24.56■■□□□ 1.52
HDLBP-220ENST00000442730 STK24Q9Y6E0 443 aa24.56■■□□□ 1.52
HDLBP-220ENST00000442730 CYP11B2P19099 503 aa24.55■■□□□ 1.52
HDLBP-220ENST00000442730 KCNA5P22460 613 aa24.55■■□□□ 1.52
HDLBP-220ENST00000442730 IRS1P35568 1242 aa24.55■■□□□ 1.52
HDLBP-220ENST00000442730 UBE3AQ05086 875 aa24.55■■□□□ 1.52
HDLBP-220ENST00000442730 AMHR2Q16671 573 aa24.55■■□□□ 1.52
HDLBP-220ENST00000442730 RSPH1Q8WYR4 309 aa24.55■■□□□ 1.52
HDLBP-220ENST00000442730 KIAA1024Q9UPX6 916 aa24.55■■□□□ 1.52
HDLBP-220ENST00000442730 PBX3P40426 434 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 HYAL1Q12794 435 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 CDCA2Q69YH5 1023 aaPredicted RBP24.54■■□□□ 1.52
HDLBP-220ENST00000442730 KCNT2Q6UVM3 1135 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 GLB1LQ6UWU2 654 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 BSNDQ8WZ55 320 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 PABPC5Q96DU9 382 aaKnown RBP24.54■■□□□ 1.52
HDLBP-220ENST00000442730 CCDC51Q96ER9 411 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 ZNF558Q96NG5 402 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 MMTAG2Q9BU76 263 aaKnown RBP24.54■■□□□ 1.52
HDLBP-220ENST00000442730 BHMT2Q9H2M3 363 aa24.54■■□□□ 1.52
HDLBP-220ENST00000442730 DDX19AQ9NUU7 478 aaKnown RBP24.54■■□□□ 1.52
HDLBP-220ENST00000442730 CDC25AP30304 524 aa24.53■■□□□ 1.52
HDLBP-220ENST00000442730 AXLP30530 894 aa24.53■■□□□ 1.52
HDLBP-220ENST00000442730 KRT79Q5XKE5 535 aa24.53■■□□□ 1.52
HDLBP-220ENST00000442730 NOTUMQ6P988 496 aa24.53■■□□□ 1.52
HDLBP-220ENST00000442730 BRAPQ7Z569 592 aa24.53■■□□□ 1.52
HDLBP-220ENST00000442730 MRPL10Q7Z7H8 261 aaKnown RBP24.53■■□□□ 1.52
HDLBP-220ENST00000442730 CPB2Q96IY4 423 aa24.53■■□□□ 1.52
HDLBP-220ENST00000442730 PCDHGC5Q9Y5F6 944 aa24.53■■□□□ 1.52
HDLBP-220ENST00000442730 LRRIQ4A6NIV6 560 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 B4GALT5O43286 388 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 OFD1O75665 1012 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 PPM1AP35813 382 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 LEXMQ3ZCV2 418 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 NOMO2Q5JPE7 1267 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 AGMOQ6ZNB7 445 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 PGBD4Q96DM1 585 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 UHRF1Q96T88 793 aaPredicted RBP24.52■■□□□ 1.52
HDLBP-220ENST00000442730 TLR9Q9NR96 1032 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 TBC1D13Q9NVG8 400 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 LZTS1Q9Y250 596 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 INPP5FQ9Y2H2 1132 aa24.52■■□□□ 1.52
HDLBP-220ENST00000442730 NCOR1O75376 2440 aa24.51■■□□□ 1.51
HDLBP-220ENST00000442730 VPS37CA5D8V6 355 aaPredicted RBP24.51■■□□□ 1.51
HDLBP-220ENST00000442730 NCK2O43639 380 aa24.51■■□□□ 1.51
HDLBP-220ENST00000442730 ARF4P18085 180 aaPredicted RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms