RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 CCDC174Q6PII3 467 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 GPATCH11Q8N954 259 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 LXNQ9BS40 222 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 ATP8A1Q9Y2Q0 1164 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 CAPN7Q9Y6W3 813 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 ARHGEF35A5YM69 484 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 EIF3BP55884 814 aaKnown RBP17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 SPDYCQ5MJ68 293 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 ADAT2Q7Z6V5 191 aaKnown RBP17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 PALB2Q86YC2 1186 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 C3orf20Q8ND61 904 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 AGPAT1Q99943 283 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 ERP44Q9BS26 406 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 UNC45AQ9H3U1 944 aa17.85■□□□□ 0.45
SEMA3B-207ENST00000441915 GOLGB1Q14789 3259 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 SETQ01105 290 aaPredicted RBP17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 MYBPC2Q14324 1141 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 CYFIP2Q96F07 1278 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 TEKT3Q9BXF9 490 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 MYH11P35749 1972 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 FAM170AA1A519 330 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 TRAPPC3O43617 180 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 PPFIA2O75334 1257 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 TRIM37O94972 964 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 TMOD1P28289 359 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 MAGOHP61326 146 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 DHX34Q14147 1143 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 FBXW10Q5XX13 1052 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 SUGP1Q8IWZ8 645 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 ATP8B4Q8TF62 1192 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 MAGOHBQ96A72 148 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.84■□□□□ 0.453e-7■■■■□ 20.8
SEMA3B-207ENST00000441915 GOPCQ9HD26 462 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 COG5Q9UP83 839 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 ALG6Q9Y672 507 aa17.84■□□□□ 0.45
SEMA3B-207ENST00000441915 SCN9AQ15858 1988 aa17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 FAM187AA6NFU0 413 aa17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 HIP1RO75146 1068 aa17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 FSBPO95073 299 aa17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 VIL1P09327 827 aaKnown RBP17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 ZNF211Q13398 564 aaPredicted RBP17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 RNF187Q5TA31 235 aaPredicted RBP17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 DUPD1Q68J44 220 aa17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 INTS8Q75QN2 995 aaKnown RBP17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 LMO3Q8TAP4 145 aa17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 HERC5Q9UII4 1024 aaKnown RBP17.83■□□□□ 0.45
SEMA3B-207ENST00000441915 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 K7ENM7 598 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 ARP10275 920 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 HMGB2P26583 209 aaKnown RBP17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 CDR1P51861 262 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 HADHBP55084 474 aaKnown RBP17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 PPARDQ03181 441 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 IFT88Q13099 833 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 BANK1Q8NDB2 785 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 VTI1AQ96AJ9 217 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 STRA6Q9BX79 667 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 ERVK-5Q9HDB9 667 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 UBE2TQ9NPD8 197 aaPredicted RBP17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 TMOD4Q9NZQ9 345 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 CTTNBP2NLQ9P2B4 639 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 RASAL2Q9UJF2 1139 aa17.83■□□□□ 0.44
SEMA3B-207ENST00000441915 MIF4GDA9UHW6 222 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 IPO5O00410 1097 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 COPB2P35606 906 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 USP8P40818 1118 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 UBL4BQ8N7F7 174 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 CHURC1Q8WUH1 139 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 ALG3Q92685 438 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 PSMD1Q99460 953 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 LARSQ9P2J5 1176 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 TRPC5Q9UL62 973 aaPredicted RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 TMX2Q9Y320 296 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 PFASO15067 1338 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 AFF2P51816 1311 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 EMSYQ7Z589 1322 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 KIAA1755Q5JYT7 1200 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 HOOK3Q86VS8 718 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 CNPY4Q8N129 248 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 PRPF38AQ8NAV1 312 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 ACER1Q8TDN7 264 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 GLG1Q92896 1179 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 PRMT6Q96LA8 375 aaPredicted RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 RANBP17Q9H2T7 1088 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 TMEM206Q9H813 350 aa17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 CNOT8Q9UFF9 292 aaKnown RBP17.82■□□□□ 0.44
SEMA3B-207ENST00000441915 FTLP02792 175 aaPredicted RBP17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 MMP10P09238 476 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 PAEPP09466 180 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 VCAM1P19320 739 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 MAPK7Q13164 816 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 C11orf63Q6NUN7 778 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 JAMLQ86YT9 394 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 DAW1Q8N136 415 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 TXLNGYQ9BZA5 131 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 DCDC2CA8MYV0 355 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 HSPA6P17066 643 aa17.81■□□□□ 0.44
SEMA3B-207ENST00000441915 HNRNPH1P31943 449 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms