RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 CBWD1Q9BRT8 395 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 DHX33Q9H6R0 707 aaKnown RBP14.35□□□□□ -0.11
CPSF4-206ENST00000441580 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 NRBP2Q9NSY0 501 aa14.35□□□□□ -0.11
CPSF4-206ENST00000441580 NOP56O00567 594 aaKnown RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 HNRNPDLO14979 420 aaKnown RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 LGR5O75473 907 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 TRIM49P0CI25 452 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 TRIM49CP0CI26 452 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 ZBTB48P10074 688 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 ACTN1P12814 892 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 SLC9A1P19634 815 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 STAT1P42224 750 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 MAGEA1P43355 309 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 SLC26A2P50443 739 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 MXI1P50539 228 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 BRDTQ58F21 947 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 ABRAQ8N0Z2 381 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 GPRC5AQ8NFJ5 357 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 GOLGA1Q92805 767 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 PARK7Q99497 189 aaKnown RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 JPH2Q9BR39 696 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 SH2D3AQ9BRG2 576 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 IRX2Q9BZI1 471 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 PORCNQ9H237 461 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 IKZF4Q9H2S9 585 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 ZNF408Q9H9D4 720 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 MLXIPQ9HAP2 919 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 GBA2Q9HCG7 927 aaPredicted RBP14.34□□□□□ -0.11
CPSF4-206ENST00000441580 KIAA1586Q9HCI6 787 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 MORF4L1Q9UBU8 362 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 APEX2Q9UBZ4 518 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 ZSWIM8A7E2V4 1837 aa14.34□□□□□ -0.11
CPSF4-206ENST00000441580 CCL15-CCL14A0A0B4J2E2 113 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 GSTTP1A0A1W2PQM5 241 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 F8VZ95 297 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 ZNF263O14978 683 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 PEX10O60683 326 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 PIGRP01833 764 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 GTF2H1P32780 548 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 TCF7P36402 384 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 STAT5BP51692 787 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 CYP27A1Q02318 531 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 CKAP4Q07065 602 aaKnown RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 FSTL1Q12841 308 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 STRN3Q13033 797 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 TTLL4Q14679 1199 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 ELF2Q15723 593 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 SNRNP35Q16560 246 aaKnown RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 CCL15Q16663 113 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 CELF3Q5SZQ8 465 aaKnown RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 WDR78Q5VTH9 848 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 IQCEQ6IPM2 695 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 ZNF710Q8N1W2 664 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 RNF10Q8N5U6 811 aaKnown RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 DEPTORQ8TB45 409 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 TMC2Q8TDI7 906 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 ZNF526Q8TF50 670 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 SCFD2Q8WU76 684 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 TCP11Q8WWU5 503 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 BBXQ8WY36 941 aaPredicted RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 UBXN4Q92575 508 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 BICD1Q96G01 975 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 FBXL18Q96ME1 805 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 CARD6Q9BX69 1037 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 TRIM10Q9UDY6 481 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 DDX41Q9UJV9 622 aaKnown RBP14.33□□□□□ -0.12
CPSF4-206ENST00000441580 USP20Q9Y2K6 914 aa14.33□□□□□ -0.12
CPSF4-206ENST00000441580 BTNL10A8MVZ5 291 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 PDHXO00330 501 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 SORBS3O60504 671 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 PGK2P07205 417 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 SOX5P35711 763 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 LIG4P49917 911 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 AMPD2Q01433 879 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 GFPT1Q06210 699 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-206ENST00000441580 TARBP2Q15633 366 aaKnown RBP14.32□□□□□ -0.12
CPSF4-206ENST00000441580 CBWD6Q4V339 395 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 EPC2Q52LR7 807 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 CBWD3Q5JTY5 395 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 CBWD5Q5RIA9 395 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-206ENST00000441580 PLPPR4Q7Z2D5 763 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 TRMT1LQ7Z2T5 733 aaKnown RBP14.32□□□□□ -0.12
CPSF4-206ENST00000441580 TRAPPC11Q7Z392 1133 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 SRGAP1Q7Z6B7 1085 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 ZNF467Q7Z7K2 595 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-206ENST00000441580 GPD1LQ8N335 351 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 C2orf69Q8N8R5 385 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 TSC1Q92574 1164 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 NOX5Q96PH1 765 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 PCYT2Q99447 389 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 KIFC3Q9BVG8 833 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 STK33Q9BYT3 514 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 LACRTQ9GZZ8 138 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 PCIF1Q9H4Z3 704 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 VTA1Q9NP79 307 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 ARGLU1Q9NWB6 273 aaPredicted RBP14.32□□□□□ -0.12
CPSF4-206ENST00000441580 TSKSQ9UJT2 592 aa14.32□□□□□ -0.12
CPSF4-206ENST00000441580 ADGRA3Q8IWK6 1321 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms