RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 RASA1P20936 1047 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 GNA11P29992 359 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 SYDE1Q6ZW31 735 aaPredicted RBP8.47□□□□□ -1.05
LMO3-208ENST00000441439 FAM13CQ8NE31 585 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 RBM46Q8TBY0 533 aaKnown RBP8.47□□□□□ -1.05
LMO3-208ENST00000441439 FBXO25Q8TCJ0 367 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 SDR42E1Q8WUS8 393 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 DNAJC9Q8WXX5 260 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 LZICQ8WZA0 190 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 SLC7A6OSQ96CW6 309 aaPredicted RBP8.47□□□□□ -1.05
LMO3-208ENST00000441439 RMDN2Q96LZ7 410 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 RPS6KC1Q96S38 1066 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 HAPLN3Q96S86 360 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 EPAS1Q99814 870 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 RAB34Q9BZG1 259 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 UBN1Q9NPG3 1134 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 LOC285556D6RIA3 1793 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 KDM3AQ9Y4C1 1321 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 MINDY4BA8MYZ0 360 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 DCTN3O75935 186 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 PON1P27169 355 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 TUBP50607 506 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 RASA2Q15283 850 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 FAM91A1Q658Y4 838 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 CHADLQ6NUI6 762 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 PPP1R21Q6ZMI0 780 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 DDX12PQ92771 950 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 MMADHCQ9H3L0 296 aaPredicted RBP8.47□□□□□ -1.05
LMO3-208ENST00000441439 ZWILCHQ9H900 591 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 CYLDQ9NQC7 956 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 PNMA3Q9UL41 463 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 USH1CQ9Y6N9 552 aa8.47□□□□□ -1.05
LMO3-208ENST00000441439 COL11A2P13942 1736 aaPredicted RBP8.47□□□□□ -1.05
LMO3-208ENST00000441439 LOXHD1Q8IVV2 1947 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 MPHOSPH10O00566 681 aaKnown RBP8.46□□□□□ -1.05
LMO3-208ENST00000441439 CYTH3O43739 400 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 VHLP40337 213 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 RPL21P46778 160 aaKnown RBP8.46□□□□□ -1.05
LMO3-208ENST00000441439 CLCN2P51788 898 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 CAV1Q03135 178 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 RRP1BQ14684 758 aaKnown RBP8.46□□□□□ -1.05
LMO3-208ENST00000441439 ARHGEF18Q6ZSZ5 1173 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 EPM2AIP1Q7L775 607 aaPredicted RBP8.46□□□□□ -1.05
LMO3-208ENST00000441439 RPUSD2Q8IZ73 545 aaKnown RBP8.46□□□□□ -1.05
LMO3-208ENST00000441439 EPS8L3Q8TE67 593 aaKnown RBP8.46□□□□□ -1.05
LMO3-208ENST00000441439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.46□□□□□ -1.05
LMO3-208ENST00000441439 SEMA4AQ9H3S1 761 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 MKNK2Q9HBH9 465 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 TMCO1Q9UM00 188 aa8.46□□□□□ -1.05
LMO3-208ENST00000441439 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.46□□□□□ -1.05
LMO3-208ENST00000441439 TMEM120BA0PK00 339 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 TP73O15350 636 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 ZPR1O75312 459 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 GM2AP17900 193 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 TAC1P20366 129 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 IBSPP21815 317 aaPredicted RBP8.46□□□□□ -1.06
LMO3-208ENST00000441439 PTDSS1P48651 473 aaKnown RBP8.46□□□□□ -1.06
LMO3-208ENST00000441439 KCNH2Q12809 1159 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 STRN3Q13033 797 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 DAAM2Q86T65 1068 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 STKLD1Q8NE28 680 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 HPS3Q969F9 1004 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 TAOK3Q9H2K8 898 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 ERVK-5Q9HDB9 667 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 IL1RAPL1Q9NZN1 696 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 STOML1Q9UBI4 398 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 MAGEA13PA6NCF6 341 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 PRPF4O43172 522 aaKnown RBP eCLIP8.46□□□□□ -1.06
LMO3-208ENST00000441439 ABHD2P08910 425 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 RAD23BP54727 409 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 RNASE9P60153 205 aaKnown RBP8.46□□□□□ -1.06
LMO3-208ENST00000441439 NR1H3Q13133 447 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 KPNB1Q14974 876 aaKnown RBP8.46□□□□□ -1.06
LMO3-208ENST00000441439 TMEM266Q2M3C6 531 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 FAM26FQ5R3K3 315 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 PRELID2Q8N945 189 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 ZNF384Q8TF68 577 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 TUBB6Q9BUF5 446 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 C6orf50Q9HD87 102 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 CHCHD3Q9NX63 227 aaKnown RBP8.46□□□□□ -1.06
LMO3-208ENST00000441439 LRP2BPQ9P2M1 347 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 DNAJB4Q9UDY4 337 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 NR2E1Q9Y466 385 aa8.46□□□□□ -1.06
LMO3-208ENST00000441439 EDIL3O43854 480 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 ADAMTS2O95450 1211 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 T-ENOLP0DO92 83 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 RFX1P22670 979 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 IL6STP40189 918 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 MCCD1P59942 119 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 RPL26P61254 145 aaKnown RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 FOXB2Q5VYV0 432 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 PPP1R18Q6NYC8 613 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 TDRPQ86YL5 185 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 RHOT2Q8IXI1 618 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 ALDH16A1Q8IZ83 802 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 KCTD17Q8N5Z5 321 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 MIGA1Q8NAN2 632 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 LNX1Q8TBB1 728 aaPredicted RBP8.45□□□□□ -1.06
LMO3-208ENST00000441439 IRGQQ8WZA9 623 aa8.45□□□□□ -1.06
LMO3-208ENST00000441439 GPKOWQ92917 476 aaPredicted RBP eCLIP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms