RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CNOT7Q9UIV1 285 aaKnown RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 NAGPAQ9UK23 515 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 USP15Q9Y4E8 981 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
LTBR-203ENST00000441074 A0A0A6YYK5 440 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 ENO4A6NNW6 628 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 SNUPNO95149 360 aaKnown RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 NPEPPSP55786 919 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 IFI35P80217 286 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 SF3A3Q12874 501 aaKnown RBP eCLIP12.85□□□□□ -0.35
LTBR-203ENST00000441074 PDIA5Q14554 519 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 ANKRD20A2Q5SQ80 823 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 ANKRD20A1Q5TYW2 823 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 ANKRD20A3Q5VUR7 823 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 TTBK2Q6IQ55 1244 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 ALKBH5Q6P6C2 394 aaKnown RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 ERICH1Q86X53 443 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 TEX9Q8N6V9 391 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 RAD54LQ92698 747 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 PRCCQ92733 491 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 RNF25Q96BH1 459 aaPredicted RBP12.85□□□□□ -0.35
LTBR-203ENST00000441074 KLHL29Q96CT2 875 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 TRIM51Q9BSJ1 452 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 TMEM109Q9BVC6 243 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 MYH4Q9Y623 1939 aa12.85□□□□□ -0.35
LTBR-203ENST00000441074 TLDC2A0PJX2 215 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 FESP07332 822 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 KRT16P08779 473 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 LINGO3P0C6S8 592 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 PECAM1P16284 738 aaPredicted RBP12.84□□□□□ -0.35
LTBR-203ENST00000441074 ATP2A2P16615 1042 aaKnown RBP12.84□□□□□ -0.35
LTBR-203ENST00000441074 ANXA13P27216 316 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 PTENP60484 403 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 C9orf131Q5VYM1 1079 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 KCTD1Q719H9 257 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 MIGA2Q7L4E1 593 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 DAAM2Q86T65 1068 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 NT5DC3Q86UY8 548 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 SPICE1Q8N0Z3 855 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 GLIS3Q8NEA6 775 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 PARD3BQ8TEW8 1205 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 HES6Q96HZ4 224 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 ERP44Q9BS26 406 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 TRIM31Q9BZY9 425 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 STMN4Q9H169 189 aaPredicted RBP12.84□□□□□ -0.35
LTBR-203ENST00000441074 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 ZFATQ9P243 1243 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 FAM187AA6NFU0 413 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 AHCYL1O43865 530 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 WFS1O76024 890 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 SUN1O94901 812 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
LTBR-203ENST00000441074 CDC25CP30307 473 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 MSH2P43246 934 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
LTBR-203ENST00000441074 LACTBP83111 547 aaPredicted RBP12.84□□□□□ -0.35
LTBR-203ENST00000441074 KLRC3Q07444 240 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 CNGA2Q16280 664 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 PTPROQ16827 1216 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 KRT79Q5XKE5 535 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 BTNL9Q6UXG8 535 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 DDX12PQ92771 950 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 PIGSQ96S52 555 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 CSRNP1Q96S65 589 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 PLCD4Q9BRC7 762 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 TMEM39BQ9GZU3 492 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 ADAM22Q9P0K1 906 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 INTUQ9ULD6 942 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 NENFQ9UMX5 172 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 DIS3Q9Y2L1 958 aaKnown RBP12.84□□□□□ -0.35
LTBR-203ENST00000441074 PCNTO95613 3336 aa12.84□□□□□ -0.35
LTBR-203ENST00000441074 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 FLOT1O75955 427 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 TXKP42681 527 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 ABL2P42684 1182 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 ATP11AP98196 1134 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 TMEM119Q4V9L6 283 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 TNFAIP8L3Q5GJ75 292 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 ASRGL1Q7L266 308 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 NIM1KQ8IY84 436 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 OGFOD1Q8N543 542 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 GMLQ99445 158 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 IDI2Q9BXS1 227 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 GOPCQ9HD26 462 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 ZNRF3Q9ULT6 936 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 DAAM1Q9Y4D1 1078 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 O00370 1275 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 FGGP02679 453 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 H2AFZP0C0S5 128 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 PRKCIP41743 596 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 DR1Q01658 176 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 SLC29A2Q14542 456 aa12.83□□□□□ -0.36
LTBR-203ENST00000441074 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.36
LTBR-203ENST00000441074 CERKLQ49MI3 558 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms