RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 ACER1Q8TDN7 264 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 IQCDQ96DY2 449 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 GJD4Q96KN9 370 aaPredicted RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 FMO2Q99518 471 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 FBXO28Q9NVF7 368 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 GSTTP1A0A1W2PQM5 241 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 SNUPNO95149 360 aaKnown RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 FLT3P36888 993 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 DRAP1Q14919 205 aaPredicted RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 MUM1Q2TAK8 710 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 AADACL2Q6P093 401 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 ZNF449Q6P9G9 518 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 RPUSD2Q8IZ73 545 aaKnown RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
PCGF3-207ENST00000440452 ACP6Q9NPH0 428 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 GAKO14976 1311 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 IRS2Q9Y4H2 1338 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 ARHGEF35A5YM69 484 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 TMEM150BA6NC51 233 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 GALCP54803 685 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 ERICH1Q86X53 443 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 KCTD10Q9H3F6 313 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
PCGF3-207ENST00000440452 K7ENM7 598 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 PGRMC1O00264 195 aaKnown RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 HNRNPH3P31942 346 aaKnown RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 SLC12A3P55017 1021 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 RWDD2BP57060 319 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 MESDQ14696 234 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 IFI16Q16666 785 aaKnown RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 USP38Q8NB14 1042 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 CCDC17Q96LX7 622 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 BATF3Q9NR55 127 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 TMOD2Q9NZR1 351 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 CTDP1Q9Y5B0 961 aaPredicted RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ABCB11O95342 1321 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ATP2A2P16615 1042 aaKnown RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 GCLMP48507 274 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 VPS41P49754 854 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ALDH5A1P51649 535 aaPredicted RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ARMC9Q7Z3E5 817 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 GLG1Q92896 1179 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 FAM84AQ96KN4 292 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 FGFR1OP2Q9NVK5 253 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 TBK1Q9UHD2 729 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 AMFRQ9UKV5 643 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 TRIM33Q9UPN9 1127 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 MYCLP12524 364 aaPredicted RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 MEI1Q5TIA1 1274 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 NSMFQ6X4W1 530 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 SP8Q8IXZ3 490 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 CEP120Q8N960 986 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ZNF577Q9BSK1 485 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ETNK1Q9HBU6 452 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 ETAA1Q9NY74 926 aa13.37□□□□□ -0.27
PCGF3-207ENST00000440452 PPP1R1BQ9UD71 204 aaPredicted RBP13.37□□□□□ -0.27
PCGF3-207ENST00000440452 RAD23BP54727 409 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SLC8A3P57103 927 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 PPM1KQ8N3J5 372 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 ARHGEF2Q92974 986 aaKnown RBP13.36□□□□□ -0.27
PCGF3-207ENST00000440452 TATDN2Q93075 761 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
PCGF3-207ENST00000440452 DBR1Q9UK59 544 aaKnown RBP13.36□□□□□ -0.27
PCGF3-207ENST00000440452 CCDC169A6NNP5 214 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 POLRMTO00411 1230 aaKnown RBP13.36□□□□□ -0.27
PCGF3-207ENST00000440452 ECE2O60344 883 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SHBGP04278 402 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SPATA31C1P0DKV0 1188 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SMARCA1P28370 1054 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 USP11P51784 963 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 ASTE1Q2TB18 679 aaPredicted RBP13.36□□□□□ -0.27
PCGF3-207ENST00000440452 FAM163AQ96GL9 167 aaPredicted RBP13.36□□□□□ -0.27
PCGF3-207ENST00000440452 PARVGQ9HBI0 331 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■□ 23.5
PCGF3-207ENST00000440452 PRR12Q9ULL5 1215 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SUN1O94901 812 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 RPA1P27694 616 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 GBP1P32455 592 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SSTR3P32745 418 aaPredicted RBP13.36□□□□□ -0.27
PCGF3-207ENST00000440452 JAG1P78504 1218 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 SEMA3FQ13275 785 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 TRIM7Q9C029 511 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 TAS2R14Q9NYV8 317 aa13.36□□□□□ -0.27
PCGF3-207ENST00000440452 AFF2P51816 1311 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 A0A1W2PRG0 241 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 SNHG28P0DPA3 235 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 PSMC2P35998 433 aaKnown RBP13.35□□□□□ -0.27
PCGF3-207ENST00000440452 STAT2P52630 851 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 CUL1Q13616 776 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 SYT2Q8N9I0 419 aaPredicted RBP13.35□□□□□ -0.27
PCGF3-207ENST00000440452 SLC35G2Q8TBE7 412 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 PRMT6Q96LA8 375 aaPredicted RBP13.35□□□□□ -0.27
PCGF3-207ENST00000440452 GANQ9H2C0 597 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
PCGF3-207ENST00000440452 TYW1Q9NV66 732 aaKnown RBP13.35□□□□□ -0.27
PCGF3-207ENST00000440452 USH1CQ9Y6N9 552 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms