RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 XKR9Q5GH70 373 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 TMEM31Q5JXX7 168 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 SRGAP1Q7Z6B7 1085 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 SLC39A11Q8N1S5 342 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 VN1R2Q8NFZ6 395 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 PRPF31Q8WWY3 499 aaKnown RBP18.78■□□□□ 0.6
COL16A1-204ENST00000440437 RSPH1Q8WYR4 309 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 MTMR9Q96QG7 549 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 CDCA3Q99618 268 aaPredicted RBP18.78■□□□□ 0.6
COL16A1-204ENST00000440437 HSD17B14Q9BPX1 270 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 TLE6Q9H808 572 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 MINDY3Q9H8M7 445 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 XPNPEP1Q9NQW7 623 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 PCDHA12Q9UN75 941 aa18.78■□□□□ 0.6
COL16A1-204ENST00000440437 FSD2A1L4K1 749 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 MEIS3P2A8K0S8 358 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 ZNF623O75123 536 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 SKIP12755 728 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 RAB27AP51159 221 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 RBM10P98175 930 aaKnown RBP18.77■□□□□ 0.6
COL16A1-204ENST00000440437 LAMTOR4Q0VGL1 99 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 PLPP4Q5VZY2 271 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 FERMT3Q86UX7 667 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 TCP11Q8WWU5 503 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 LPPQ93052 612 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 MTRQ99707 1265 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 TCF25Q9BQ70 676 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 TTC12Q9H892 705 aaPredicted RBP18.77■□□□□ 0.6
COL16A1-204ENST00000440437 SPG21Q9NZD8 308 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 PUF60Q9UHX1 559 aaKnown RBP18.77■□□□□ 0.6
COL16A1-204ENST00000440437 LIMCH1Q9UPQ0 1083 aa18.77■□□□□ 0.6
COL16A1-204ENST00000440437 FAM86C2PA6NEL3 165 aa18.76■□□□□ 0.59
COL16A1-204ENST00000440437 CCDC83Q8IWF9 413 aa18.76■□□□□ 0.59
COL16A1-204ENST00000440437 TPH2Q8IWU9 490 aa18.76■□□□□ 0.59
COL16A1-204ENST00000440437 POP1Q99575 1024 aaKnown RBP18.76■□□□□ 0.59
COL16A1-204ENST00000440437 KIF2CQ99661 725 aa18.76■□□□□ 0.59
COL16A1-204ENST00000440437 ENTPD7Q9NQZ7 604 aa18.76■□□□□ 0.59
COL16A1-204ENST00000440437 TDRD15B5MCY1 1934 aaKnown RBP18.75■□□□□ 0.59
COL16A1-204ENST00000440437 HIDE1A8MVS5 230 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 ASAP2O43150 1006 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 SRGAP2CP0DJJ0 459 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 HOXA11P31270 313 aaPredicted RBP18.75■□□□□ 0.59
COL16A1-204ENST00000440437 TXKP42681 527 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 BCAR1P56945 870 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 GUCY1B3Q02153 619 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 KRT17Q04695 432 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 LONRF3Q496Y0 759 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 C8orf34Q49A92 452 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 TMEM184AQ6ZMB5 413 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 RNF149Q8NC42 400 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 TMEM60Q9H2L4 133 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 NGRNQ9NPE2 291 aaKnown RBP18.75■□□□□ 0.59
COL16A1-204ENST00000440437 ANKEF1Q9NU02 776 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 TBC1D13Q9NVG8 400 aa18.75■□□□□ 0.59
COL16A1-204ENST00000440437 POTEMA6NI47 508 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 NT5C1B-RDH14C9J2C7 533 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 OFD1O75665 1012 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 CENPBP07199 599 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-204ENST00000440437 ALADP13716 330 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 UBXN11Q5T124 520 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 GLB1LQ6UWU2 654 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 AGMOQ6ZNB7 445 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 TMEM173Q86WV6 379 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-204ENST00000440437 LLPHQ9BRT6 129 aaKnown RBP18.74■□□□□ 0.59
COL16A1-204ENST00000440437 NRDE2Q9H7Z3 1164 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 USP15Q9Y4E8 981 aaPredicted RBP18.74■□□□□ 0.59
COL16A1-204ENST00000440437 PCDHB2Q9Y5E7 798 aa18.74■□□□□ 0.59
COL16A1-204ENST00000440437 DCXO43602 365 aa18.73■□□□□ 0.59
COL16A1-204ENST00000440437 ZC3H11AO75152 810 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL16A1-204ENST00000440437 ALDH7A1P49419 539 aaKnown RBP18.73■□□□□ 0.59
COL16A1-204ENST00000440437 RARRES1P49788 294 aa18.73■□□□□ 0.59
COL16A1-204ENST00000440437 MXD4Q14582 209 aaPredicted RBP18.73■□□□□ 0.59
COL16A1-204ENST00000440437 NOMO2Q5JPE7 1267 aa18.73■□□□□ 0.59
COL16A1-204ENST00000440437 TMC7Q7Z402 723 aa18.73■□□□□ 0.59
COL16A1-204ENST00000440437 MRPL10Q7Z7H8 261 aaKnown RBP18.73■□□□□ 0.59
COL16A1-204ENST00000440437 IFNLR1Q8IU57 520 aaPredicted RBP18.73■□□□□ 0.59
COL16A1-204ENST00000440437 PGBD4Q96DM1 585 aa18.73■□□□□ 0.59
COL16A1-204ENST00000440437 C8orf76Q96K31 380 aa18.73■□□□□ 0.59
COL16A1-204ENST00000440437 CARNS1A5YM72 827 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 PRR33A8MZF0 331 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 B4GALT3O60512 393 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 DGAT1O75907 488 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 MCM7P33993 719 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 PTENP60484 403 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 POU5F1BQ06416 359 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 CAPSQ13938 189 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 SMC1AQ14683 1233 aaKnown RBP18.72■□□□□ 0.59
COL16A1-204ENST00000440437 PCBP1Q15365 356 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL16A1-204ENST00000440437 SAFBQ15424 915 aaKnown RBP eCLIP18.72■□□□□ 0.59
COL16A1-204ENST00000440437 ASAP3Q8TDY4 903 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 BCL7CQ8WUZ0 217 aaPredicted RBP18.72■□□□□ 0.59
COL16A1-204ENST00000440437 SUSD6Q92537 303 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 TMEM169Q96HH4 297 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 ZBP1Q9H171 429 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 INPP5FQ9Y2H2 1132 aa18.72■□□□□ 0.59
COL16A1-204ENST00000440437 C2orf71A6NGG8 1288 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 TSPAN1O60635 241 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 GALTP07902 379 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 SPATA31C1P0DKV0 1188 aa18.71■□□□□ 0.59
COL16A1-204ENST00000440437 ARL2P36404 184 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms