RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 COBLL1Q53SF7 1204 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CDKAL1Q5VV42 579 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TAF2Q6P1X5 1199 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 C4orf19Q8IY42 314 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MAGEC2Q9UBF1 373 aaPredicted RBP16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RSPH10B2B2RC85 870 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CHRNA1P02708 482 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RSPH10BP0C881 870 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MUTP22033 750 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CCNE1P24864 410 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MGAT3Q09327 533 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TBC1D8BQ0IIM8 1120 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 COASYQ13057 564 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 FAM114A1Q8IWE2 563 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 KIAA0319LQ8IZA0 1049 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 LINC01465Q8N7H1 131 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 P2RX5Q93086 422 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CEP170P1Q96L14 293 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MED15Q96RN5 788 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.03■□□□□ 0.164e-6■■■■□ 19.4
TNFRSF1A-204ENST00000440083 IL23AQ9NPF7 189 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RTN4Q9NQC3 1192 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CYP26B1Q9NR63 512 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PANK4Q9NVE7 773 aa16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.03■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SMIM35A0A1B0GVV1 85 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 KIF20AO95235 890 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 LYPLA2O95372 231 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 EYA4O95677 639 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 VTNP04004 478 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TPM2P07951 284 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CYP11B2P19099 503 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CLCN1P35523 988 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SLC12A3P55017 1021 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MRPS6P82932 125 aaKnown RBP16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MKRN4PQ13434 485 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SHHQ15465 462 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 XKR9Q5GH70 373 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TMEM240Q5SV17 173 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 EFCAB12Q6NXP0 572 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 VSTM4Q8IW00 320 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ZNF668Q96K58 619 aaPredicted RBP16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TSG101Q99816 390 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 KCNF1Q9H3M0 494 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 THAP9Q9H5L6 903 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SLC39A2Q9NP94 309 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CDY2AQ9Y6F7 541 aa16.02■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MYH11P35749 1972 aa16.02■□□□□ 0.15
TNFRSF1A-204ENST00000440083 TRIM49BA6NDI0 452 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 KCNJ18B7U540 433 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 ZNF500O60304 480 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 TBCAO75347 108 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 BMP8BP34820 402 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 STK4Q13043 487 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 KCNJ12Q14500 433 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 FAM26DQ5JW98 314 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 ZNF365Q70YC5 407 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 RPAINQ86UA6 219 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 GUF1Q8N442 669 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 SYT2Q8N9I0 419 aaPredicted RBP16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 KIAA0895Q8NCT3 520 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 DNAJC19Q96DA6 116 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 ZHX3Q9H4I2 956 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 CDHR5Q9HBB8 845 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 GINS2Q9Y248 185 aa16.01■□□□□ 0.15
TNFRSF1A-204ENST00000440083 IGKV6-21A0A0C4DH24 114 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 A0A1B0GTH6 734 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 MAGEB2O15479 319 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 CAND2O75155 1236 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 GHRP10912 638 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 SFPQP23246 707 aaKnown RBP eCLIP16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 RFC2P35250 354 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 RARRES1P49788 294 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 KIZQ2M2Z5 673 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 RSPH3Q86UC2 560 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 CREBRFQ8IUR6 639 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 MYOCDQ8IZQ8 938 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 CSGALNACT2Q8N6G5 542 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 TMEM143Q96AN5 459 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 LIMA1Q9UHB6 759 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 AKT3Q9Y243 479 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 TRPV2Q9Y5S1 764 aa16■□□□□ 0.15
TNFRSF1A-204ENST00000440083 MAFO75444 373 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 CXCL10P02778 98 aa15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 EEF1GP26641 437 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 POLGP54098 1239 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 LPIN1Q14693 890 aa15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 EMC2Q15006 297 aa15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 HERC4Q5GLZ8 1057 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 TCP11X2Q5H9J9 407 aa15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 TTI2Q6NXR4 508 aa15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 PSRC1Q6PGN9 363 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-204ENST00000440083 OTUD6AQ7L8S5 288 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms