RNA–Protein interactions for RNA: ENST00000439958.7

CPSF7-205, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF7, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-205ENST00000439958 DNAJC7Q99615 494 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 GPR20Q99678 358 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 TARS2Q9BW92 718 aaKnown RBP16.42■□□□□ 0.22
CPSF7-205ENST00000439958 TOPORSQ9NS56 1045 aaPredicted RBP16.42■□□□□ 0.22
CPSF7-205ENST00000439958 CYP2C19P33261 490 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 BFSP1Q12934 665 aa16.42■□□□□ 0.22
CPSF7-205ENST00000439958 SOCS7O14512 581 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 ENC1O14682 589 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 IBSPP21815 317 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 VAMP7P51809 220 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 ASIC2Q16515 512 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 SNRNP35Q16560 246 aaKnown RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 PTPROQ16827 1216 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 SLC9C1Q4G0N8 1177 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 ANKRD23Q86SG2 305 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 ZBTB45Q96K62 511 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 IFIH1Q9BYX4 1025 aaKnown RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 ADAMTS1Q9UHI8 967 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 MAFBQ9Y5Q3 323 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 MYH9P35579 1960 aaKnown RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 KIF2AO00139 706 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 DYNC1LI2O43237 492 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 GFPT2O94808 682 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 UCHL3P15374 230 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 CETN1Q12798 172 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 JAKMIP2Q96AA8 810 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 PRIMPOLQ96LW4 560 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 DUSP10Q9Y6W6 482 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 GOLGA6L9A6NEM1 432 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 ZBTB48P10074 688 aaPredicted RBP16.41■□□□□ 0.22
CPSF7-205ENST00000439958 TNNI1P19237 187 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 PON1P27169 355 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 FMO5P49326 533 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 KIF11P52732 1056 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 BIRC3Q13489 604 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 TTYH3Q9C0H2 523 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 ARHGAP20Q9P2F6 1191 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 AKT3Q9Y243 479 aa16.41■□□□□ 0.22
CPSF7-205ENST00000439958 IGSF9BQ9UPX0 1349 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 DNAJC25-GNG10A0A024R161 153 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 PSMB7Q99436 277 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 CEP72Q9P209 647 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 SLC16A3O15427 465 aaKnown RBP16.4■□□□□ 0.22
CPSF7-205ENST00000439958 ITGBL1O95965 494 aaPredicted RBP16.4■□□□□ 0.22
CPSF7-205ENST00000439958 GLRA2P23416 452 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 RGMBQ6NW40 437 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 PDXDC1Q6P996 788 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 RNPEPQ9H4A4 650 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 KRT83P78385 493 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 IRX5P78411 483 aaPredicted RBP16.4■□□□□ 0.22
CPSF7-205ENST00000439958 TMEM62Q0P6H9 643 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 ALCAMQ13740 583 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 SLC35F6Q8N357 371 aa16.4■□□□□ 0.22
CPSF7-205ENST00000439958 PARP14Q460N5 1801 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 GTF2BQ00403 316 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 PSPC1Q8WXF1 523 aaKnown RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 ZIC5Q96T25 663 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 FAM49AQ9H0Q0 323 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 NOL4O94818 638 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 STBD1O95210 358 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 ADRB2P07550 413 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 MXI1P50539 228 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 KCNV1Q6PIU1 500 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 INTS8Q75QN2 995 aaKnown RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 SAPCD2Q86UD0 394 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 OR6J1Q8NGC5 347 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 ZNF215Q9UL58 517 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 BUB1O43683 1085 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 PPP1R37O75864 691 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 MAGEA1P43355 309 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 FAM110CQ1W6H9 321 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 EFCAB12Q6NXP0 572 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 SHCBP1Q8NEM2 672 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 NPLOC4Q8TAT6 608 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 GTF3C2Q8WUA4 911 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 TIPINQ9BVW5 301 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 SMARCAD1Q9H4L7 1026 aa16.39■□□□□ 0.21
CPSF7-205ENST00000439958 UBE2TQ9NPD8 197 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 SUCLA2Q9P2R7 463 aaPredicted RBP16.39■□□□□ 0.21
CPSF7-205ENST00000439958 SCN4AP35499 1836 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 STRNO43815 780 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 GH1P01241 217 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 ADSSP30520 456 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 NCKAP1LP55160 1127 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 PPP3CAQ08209 521 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 CCL14Q16627 93 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 TRIM65Q6PJ69 517 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 RASAL3Q86YV0 1011 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 TINF2Q9BSI4 451 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 MSTO1Q9BUK6 570 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 LACRTQ9GZZ8 138 aa16.38■□□□□ 0.21
CPSF7-205ENST00000439958 MAPTP10636 758 aaKnown RBP16.38■□□□□ 0.21
CPSF7-205ENST00000439958 PPP2R5AQ15172 486 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms