RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 POLR3FQ9H1D9 316 aaPredicted RBP12.83□□□□□ -0.35
SMAD3-202ENST00000439724 PCIF1Q9H4Z3 704 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 MROH8Q9H579 483 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 AJAP1Q9UKB5 411 aaPredicted RBP12.83□□□□□ -0.35
SMAD3-202ENST00000439724 DUSP10Q9Y6W6 482 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 GSTTP1A0A1W2PQM5 241 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 SOCS7O14512 581 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 SORBS3O60504 671 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 H2AFXP16104 143 aaPredicted RBP12.83□□□□□ -0.36
SMAD3-202ENST00000439724 FERP16591 822 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 PTK2Q05397 1052 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 ENPEPQ07075 957 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 KCTD2Q14681 263 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 EMC2Q15006 297 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 MTERF2Q49AM1 385 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 C10orf76Q5T2E6 689 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 KCNV1Q6PIU1 500 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 RNF10Q8N5U6 811 aaKnown RBP12.83□□□□□ -0.36
SMAD3-202ENST00000439724 MORC4Q8TE76 937 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 AFAP1L1Q8TED9 768 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 IFT74Q96LB3 600 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 PCYT2Q99447 389 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 MMP19Q99542 508 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 KIFC3Q9BVG8 833 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 STK33Q9BYT3 514 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 DHX33Q9H6R0 707 aaKnown RBP12.83□□□□□ -0.36
SMAD3-202ENST00000439724 ARHGAP28Q9P2N2 729 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 PNMA3Q9UL41 463 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 PPME1Q9Y570 386 aa12.83□□□□□ -0.36
SMAD3-202ENST00000439724 ZNFX1Q9P2E3 1918 aaKnown RBP12.83□□□□□ -0.36
SMAD3-202ENST00000439724 ADGRA3Q8IWK6 1321 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 A0A087X0T9 212 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 ANKRD63C9JTQ0 380 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 GFPT2O94808 682 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 ATP1A1P05023 1023 aaKnown RBP12.82□□□□□ -0.36
SMAD3-202ENST00000439724 ADRB2P07550 413 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 FAM228BP0C875 321 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 CNGA1P29973 690 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 ADSSP30520 456 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 SOX5P35711 763 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 RFC5P40937 340 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 STAT1P42224 750 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 POLGP54098 1239 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-202ENST00000439724 SOX10P56693 466 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 ARID5AQ03989 594 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 HSP90AA2PQ14568 343 aaPredicted RBP12.82□□□□□ -0.36
SMAD3-202ENST00000439724 Q3C1V9 767 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 EPC2Q52LR7 807 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 C1orf220Q5T0J3 134 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 TEX35Q5T0J7 233 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 FAM160B1Q5W0V3 765 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 FBXO38Q6PIJ6 1188 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 GPR161Q8N6U8 529 aaKnown RBP12.82□□□□□ -0.36
SMAD3-202ENST00000439724 RDH13Q8NBN7 331 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 LMO3Q8TAP4 145 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 VTI1AQ96AJ9 217 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 FBXL18Q96ME1 805 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 ALS2CR12Q96Q35 445 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 CEP89Q96ST8 783 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 R3HDMLQ9H3Y0 253 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 MLXIPQ9HAP2 919 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 APEX2Q9UBZ4 518 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 DNAJC12Q9UKB3 198 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 NENFQ9UMX5 172 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 USP20Q9Y2K6 914 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 SAR1BQ9Y6B6 198 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 CAPN6Q9Y6Q1 641 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 EMSYQ7Z589 1322 aa12.82□□□□□ -0.36
SMAD3-202ENST00000439724 BTNL10A8MVZ5 291 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 F8VZ95 297 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 GRIN3BO60391 1043 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 MOCS3O95396 460 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 GGPS1O95749 300 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 GARTP22102 1010 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 ERVK-9P63128 1117 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 DLG4P78352 724 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 PPP3CAQ08209 521 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 CETN1Q12798 172 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 TARBP2Q15633 366 aaKnown RBP12.81□□□□□ -0.36
SMAD3-202ENST00000439724 GPR162Q16538 588 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 BRDTQ58F21 947 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-202ENST00000439724 SLC39A4Q6P5W5 647 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 GJB7Q6PEY0 223 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 ZNF571Q7Z3V5 609 aaPredicted RBP12.81□□□□□ -0.36
SMAD3-202ENST00000439724 PLEKHO2Q8TD55 490 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 SEPT1Q8WYJ6 367 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 SLC10A4Q96EP9 437 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMAD3-202ENST00000439724 PORCNQ9H237 461 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 ADAMTS1Q9UHI8 967 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 SLC45A1Q9Y2W3 748 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 JRKLQ9Y4A0 524 aa12.81□□□□□ -0.36
SMAD3-202ENST00000439724 CTAGE15A4D2H0 777 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 ENC1O14682 589 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 LGR5O75473 907 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 PGK2P07205 417 aa12.8□□□□□ -0.36
SMAD3-202ENST00000439724 CCDC172P0C7W6 258 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms