RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 GJB2P29033 226 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 LTBRP36941 435 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 CAPSQ13938 189 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 LEXMQ3ZCV2 418 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 NAALADL2Q58DX5 795 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 GPRC5CQ9NQ84 441 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 CHST12Q9NRB3 414 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 ANKEF1Q9NU02 776 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 AGPAT5Q9NUQ2 364 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 RNF216Q9NWF9 866 aaPredicted RBP15.41■□□□□ 0.06
PRAME-209ENST00000439106 NOL7Q9UMY1 257 aaKnown RBP15.41■□□□□ 0.06
PRAME-209ENST00000439106 INPP5FQ9Y2H2 1132 aa15.41■□□□□ 0.06
PRAME-209ENST00000439106 NT5C1B-RDH14C9J2C7 533 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 DGAT1O75907 488 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 GLRA2P23416 452 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 ERVFC1P60507 584 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 RBM10P98175 930 aaKnown RBP15.4■□□□□ 0.06
PRAME-209ENST00000439106 ECM1Q16610 540 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 MCTP1Q6DN14 999 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 PTCRAQ6ISU1 281 aaPredicted RBP15.4■□□□□ 0.06
PRAME-209ENST00000439106 KCNT2Q6UVM3 1135 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 FAM43BQ6ZT52 329 aaPredicted RBP15.4■□□□□ 0.06
PRAME-209ENST00000439106 SRGAP1Q7Z6B7 1085 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 EXOC8Q8IYI6 725 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 C4orf32Q8N8J7 132 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 CPB2Q96IY4 423 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 POLR3FQ9H1D9 316 aaPredicted RBP15.4■□□□□ 0.06
PRAME-209ENST00000439106 AAASQ9NRG9 546 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 MYH15Q9Y2K3 1946 aa15.4■□□□□ 0.06
PRAME-209ENST00000439106 PP2D1A8MPX8 630 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 PER2O15055 1255 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 GAS2O43903 313 aaKnown RBP15.39■□□□□ 0.05
PRAME-209ENST00000439106 B4GALT3O60512 393 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 TSPAN1O60635 241 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 EOMESO95936 686 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 HOXA11P31270 313 aaPredicted RBP15.39■□□□□ 0.05
PRAME-209ENST00000439106 ARL2P36404 184 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 NRIP1P48552 1158 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 COL19A1Q14993 1142 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 UBXN11Q5T124 520 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 PLPP4Q5VZY2 271 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 MICAL1Q8TDZ2 1067 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 ZNF558Q96NG5 402 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 POLD4Q9HCU8 107 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 TUFT1Q9NNX1 390 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 CD320Q9NPF0 282 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 TLR9Q9NR96 1032 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 PCDHB2Q9Y5E7 798 aa15.39■□□□□ 0.05
PRAME-209ENST00000439106 INO80B-WBP1J3KQ70 363 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 ASAP2O43150 1006 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 B4GALT5O43286 388 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 ZC3H11AO75152 810 aaKnown RBP eCLIP15.38■□□□□ 0.052e-64■■□□□ 11.7
PRAME-209ENST00000439106 ERLIN2O94905 339 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 TRAPPC10P48553 1259 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 AFF1P51825 1210 aaKnown RBP15.38■□□□□ 0.05
PRAME-209ENST00000439106 PTENP60484 403 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 MBTD1Q05BQ5 628 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 PTGDRQ13258 359 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 ORC2Q13416 577 aaPredicted RBP15.38■□□□□ 0.05
PRAME-209ENST00000439106 CTC1Q2NKJ3 1217 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 AGMOQ6ZNB7 445 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 TMEM173Q86WV6 379 aaPredicted RBP15.38■□□□□ 0.05
PRAME-209ENST00000439106 CDR2LQ86X02 465 aaPredicted RBP15.38■□□□□ 0.05
PRAME-209ENST00000439106 KHSRPQ92945 711 aaKnown RBP eCLIP15.38■□□□□ 0.05
PRAME-209ENST00000439106 POLR3CQ9BUI4 534 aaPredicted RBP15.38■□□□□ 0.05
PRAME-209ENST00000439106 EIF2AQ9BY44 585 aaKnown RBP15.38■□□□□ 0.05
PRAME-209ENST00000439106 GBP3Q9H0R5 595 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 TBC1D13Q9NVG8 400 aa15.38■□□□□ 0.05
PRAME-209ENST00000439106 PLXNA3P51805 1871 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 GRXCR2A6NFK2 248 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 OFD1O75665 1012 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 GLP2RO95838 553 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 RPA1P27694 616 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 CDC25AP30304 524 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 CCT6AP40227 531 aaKnown RBP15.37■□□□□ 0.05
PRAME-209ENST00000439106 NDUFV1P49821 464 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 RAB27AP51159 221 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 TFDP1Q14186 410 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 MXD4Q14582 209 aaPredicted RBP15.37■□□□□ 0.05
PRAME-209ENST00000439106 IL17AQ16552 155 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 SLC39A11Q8N1S5 342 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 ERMNQ8TAM6 284 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 BSNDQ8WZ55 320 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 MRPS27Q92552 414 aaKnown RBP15.37■□□□□ 0.05
PRAME-209ENST00000439106 TCF25Q9BQ70 676 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 TRAIPQ9BWF2 469 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 MRPL9Q9BYD2 267 aaKnown RBP15.37■□□□□ 0.05
PRAME-209ENST00000439106 NRDE2Q9H7Z3 1164 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 DNAJB4Q9UDY4 337 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 LRWD1Q9UFC0 647 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 BARX2Q9UMQ3 279 aaPredicted RBP15.37■□□□□ 0.05
PRAME-209ENST00000439106 HES2Q9Y543 173 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 CITO14578 2027 aa15.37■□□□□ 0.05
PRAME-209ENST00000439106 LRRIQ4A6NIV6 560 aa15.36■□□□□ 0.05
PRAME-209ENST00000439106 HIDE1A8MVS5 230 aa15.36■□□□□ 0.05
PRAME-209ENST00000439106 H3BQV1 296 aa15.36■□□□□ 0.05
PRAME-209ENST00000439106 FSCN2O14926 492 aa15.36■□□□□ 0.05
PRAME-209ENST00000439106 ZNF623O75123 536 aa15.36■□□□□ 0.05
PRAME-209ENST00000439106 FXR2P51116 673 aaKnown RBP eCLIP15.36■□□□□ 0.056e-8■□□□□ 9.7
PRAME-209ENST00000439106 BCAR1P56945 870 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms