RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 EIF2AK2P19525 551 aaKnown RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 FGFR4P22455 802 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 SESN3P58005 492 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CEP55Q53EZ4 464 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 PHLDB3Q6NSJ2 640 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 DNAJC24Q6P3W2 148 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 FAM47EQ6ZV65 393 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 IRF2BP1Q8IU81 584 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 SYT2Q8N9I0 419 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 FLAD1Q8NFF5 587 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 NCAPGQ9BPX3 1015 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 TDRD3Q9H7E2 651 aaKnown RBP7.17□□□□□ -1.26
CSDE1-205ENST00000438362 BLOC1S4Q9NUP1 217 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 SIK3Q9Y2K2 1263 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 SPATA31A1Q5TZJ5 1347 aa7.17□□□□□ -1.26
CSDE1-205ENST00000438362 CCDC160A6NGH7 325 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 NOP56O00567 594 aaKnown RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 MAPK13O15264 365 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SLC16A4O15374 487 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 RTN2O75298 545 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 P4HBP07237 508 aaKnown RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 INHBAP08476 426 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TMEM191BP0C7N4 346 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 PON1P27169 355 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 YWHAGP61981 247 aaKnown RBP eCLIP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SPARCL1Q14515 664 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 KRT39Q6A163 491 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 C3orf67Q6ZVT6 689 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ACTRT1Q8TDG2 376 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SCFD1Q8WVM8 642 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TNFRSF25Q93038 417 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TMBIM4Q9HC24 238 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ADAM22Q9P0K1 906 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 NYAP2Q9P242 653 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ATF5Q9Y2D1 282 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ALG6Q9Y672 507 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 LRRD1A4D1F6 860 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SORBS3O60504 671 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 RPS6KA5O75582 802 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 NDUFB10O96000 172 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 MSH2P43246 934 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TNFAIP1Q13829 316 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ZC2HC1CQ53FD0 456 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 PRR5LQ6MZQ0 368 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 CASC4Q6P4E1 433 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 GJB7Q6PEY0 223 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 RPAINQ86UA6 219 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SP8Q8IXZ3 490 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 NIM1KQ8IY84 436 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 C1orf54Q8WWF1 131 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SAYSD1Q9NPB0 183 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 HAUS2Q9NVX0 235 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 AIPL1Q9NZN9 384 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SCINQ9Y6U3 715 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 CNTNAP4Q9C0A0 1308 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 EIF3DO15371 548 aaKnown RBP eCLIP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 MED24O75448 989 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TNNC2P02585 160 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 PEX19P40855 299 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 QARSP47897 775 aaKnown RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SNX16P57768 344 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TAF11Q15544 211 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ZNF449Q6P9G9 518 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 CENPUQ71F23 418 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ZNF571Q7Z3V5 609 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 HAUS6Q7Z4H7 955 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ZBTB8OSQ8IWT0 167 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TSEN2Q8NCE0 465 aaKnown RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SLC7A3Q8WY07 619 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 GLG1Q92896 1179 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 MTRQ99707 1265 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 CPSF2Q9P2I0 782 aaKnown RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 TNS2Q63HR2 1409 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 WTIPA6NIX2 430 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 CYP26A1O43174 497 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 MYBL2P10244 700 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ABCD1P33897 745 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 HSPA9P38646 679 aaKnown RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SLC20A2Q08357 652 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 NR1H3Q13133 447 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 MIIPQ5JXC2 388 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 EPM2AIP1Q7L775 607 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SCYL3Q8IZE3 742 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 C3orf20Q8ND61 904 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 ATP2A3Q93084 1043 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 SNF8Q96H20 258 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 NUDT12Q9BQG2 462 aa7.16□□□□□ -1.26
CSDE1-205ENST00000438362 RTFDC1Q9BY42 306 aaPredicted RBP7.16□□□□□ -1.26
CSDE1-205ENST00000438362 GOLGA8SH3BPF8 625 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 DCTN3O75935 186 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 MT-ND3P03897 115 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 FAM153BP0C7A2 387 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 KRT17Q04695 432 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 MYO1EQ12965 1108 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 MTMR1Q13613 665 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 KRT81Q14533 505 aa7.15□□□□□ -1.26
CSDE1-205ENST00000438362 SLC29A2Q14542 456 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms