RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 MTHFD1LQ6UB35 978 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 SEC16BQ96JE7 1060 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 WDR11Q9BZH6 1224 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 TRIM13O60858 407 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 MTRF1O75570 445 aaKnown RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 GPC5P78333 572 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 HIF1AQ16665 826 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ITPRIPL1Q6GPH6 555 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ALKBH5Q6P6C2 394 aaKnown RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 GLG1Q92896 1179 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ULK4Q96C45 1275 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 AS3MTQ9HBK9 375 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 PAPOLBQ9NRJ5 636 aaKnown RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 G3BP2Q9UN86 482 aaKnown RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 DYNLT1P63172 113 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 SEPT1Q8WYJ6 367 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 FSD1LQ9BXM9 530 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ASNSD1Q9NWL6 643 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 SFMBT1Q9UHJ3 866 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 MYH10P35580 1976 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 CCT8L1PA6NM43 557 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 SMAPO00193 183 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 PSMC6P62333 389 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 KCNA1Q09470 495 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 TSSK1BQ9BXA7 367 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ACEP12821 1306 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ARHGEF11O15085 1522 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 H2AFYO75367 372 aaKnown RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 PSMA2P25787 234 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 IL12RB1P42701 662 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 TTC33Q6PID6 262 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 METTL13Q8N6R0 699 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ROPN1BQ9BZX4 212 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ROPN1Q9HAT0 212 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 KIAA1024Q9UPX6 916 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 DNALI1O14645 258 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-209ENST00000437951 TRIM54Q9BYV2 358 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 CYP4F11Q9HBI6 524 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ETAA1Q9NY74 926 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ADGBQ8N7X0 1667 aa12.22□□□□□ -0.45
PTCH1-209ENST00000437951 ASPRV1Q53RT3 343 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 FBXW10Q5XX13 1052 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 SCFD1Q8WVM8 642 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 KANSL1LA0AUZ9 987 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 TAB1Q15750 504 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 LRRC49Q8IUZ0 686 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 GPIHBP1Q8IV16 184 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 GJA10Q969M2 543 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 PIGUQ9H490 435 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 CD109Q6YHK3 1445 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 PDIA3P30101 505 aaKnown RBP12.21□□□□□ -0.45
PTCH1-209ENST00000437951 HMOX2P30519 316 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 ATXN3P54252 364 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-209ENST00000437951 TRIM72Q6ZMU5 477 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 EFL1Q7Z2Z2 1120 aaKnown RBP12.21□□□□□ -0.45
PTCH1-209ENST00000437951 KRT27Q7Z3Y8 459 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 MTERF3Q96E29 417 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 MRPL48Q96GC5 212 aaKnown RBP12.21□□□□□ -0.45
PTCH1-209ENST00000437951 ANO3Q9BYT9 981 aa12.21□□□□□ -0.45
PTCH1-209ENST00000437951 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 SPAG6O75602 509 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 ANXA1P04083 346 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 SCRN1Q12765 414 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 CUL4AQ13619 759 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 SLFN12LQ6IEE8 588 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 RYBPQ8N488 228 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 TAB3Q8N5C8 712 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 YTHDC2Q9H6S0 1430 aaKnown RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 H2AFY2Q9P0M6 372 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 SEC24DO94855 1032 aaPredicted RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 ABL1P00519 1130 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 PABPC4Q13310 644 aaKnown RBP eCLIP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 DCTN2Q13561 401 aaKnown RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 CCDC149Q6ZUS6 474 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 NOP9Q86U38 636 aaKnown RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 TTC39CQ8N584 583 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 ZNF579Q8NAF0 562 aaKnown RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 MAGED4Q96JG8 741 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 HINFPQ9BQA5 517 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 BBS2Q9BXC9 721 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 NPATQ14207 1427 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 TSPAN9O75954 239 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 ALBP02768 609 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 SERPINB9P50453 376 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 GYS2P54840 703 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 FAM47CQ5HY64 1035 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 CC2D2BQ6DHV5 1058 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 RINLQ6ZS11 566 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 RSRC2Q7L4I2 434 aaKnown RBP12.21□□□□□ -0.46
PTCH1-209ENST00000437951 SMARCAL1Q9NZC9 954 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 DKK3Q9UBP4 350 aa12.21□□□□□ -0.46
PTCH1-209ENST00000437951 FAM25AB3EWG3 89 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 FAM25CB3EWG5 89 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 FAM25GB3EWG6 89 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 EPS8Q12929 822 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 NLRP9Q7RTR0 991 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 ZBED2Q9BTP6 218 aa12.2□□□□□ -0.46
PTCH1-209ENST00000437951 KRCC1Q9NPI7 259 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms