RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 KRT75O95678 551 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 HLA-DRAP01903 254 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 MTHFD1P11586 935 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 NQO1P15559 274 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 GNA11P29992 359 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 GSSP48637 474 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PTDSS1P48651 473 aaKnown RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 RAC1P63000 192 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 PDCLQ13371 301 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 Q3C1V9 767 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 LIN52Q52LA3 116 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 BTBD8Q5XKL5 378 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 TTBK2Q6IQ55 1244 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ANGPTL8Q6UXH0 198 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 C4orf22Q6V702 233 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 TAS1R3Q7RTX0 852 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 FAM83AQ86UY5 434 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ANKMY2Q8IV38 441 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 SLC44A2Q8IWA5 706 aaPredicted RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.97□□□□□ -1.29
MCF2-205ENST00000437564 ANKS4BQ8N8V4 417 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 STK32AQ8WU08 396 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 RUFY2Q8WXA3 655 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 DNAJC9Q8WXX5 260 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 NXPE3Q969Y0 559 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 EME1Q96AY2 570 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 NLRP4Q96MN2 994 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 FERD3LQ96RJ6 166 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 CTRCQ99895 268 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.97□□□□□ -1.29
MCF2-205ENST00000437564 DNAJC25Q9H1X3 360 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 SUGCTQ9HAC7 445 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 ETNK2Q9NVF9 386 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 DBF4Q9UBU7 674 aaPredicted RBP6.97□□□□□ -1.29
MCF2-205ENST00000437564 ANAPC5Q9UJX4 755 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 USP16Q9Y5T5 823 aa6.97□□□□□ -1.29
MCF2-205ENST00000437564 SBNO1A3KN83 1393 aa6.96□□□□□ -1.29
MCF2-205ENST00000437564 SH3PXD2BA1X283 911 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CARNS1A5YM72 827 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CCT8L1PA6NM43 557 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 PFDN6O15212 129 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 NCAM2O15394 837 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 PFKFB2O60825 505 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 KLHL2O95198 593 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ARIH2O95376 493 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 EGFRP00533 1210 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 PABPC4LP0CB38 370 aaKnown RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 VCLP18206 1134 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 RFX1P22670 979 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CAP2P40123 477 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 MDH1P40925 334 aaKnown RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 ASMTP46597 345 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ARFIP2P53365 341 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 TAGLNQ01995 201 aaKnown RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 SMARCB1Q12824 385 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 TCEAL1Q15170 157 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 TAF1CQ15572 869 aaPredicted RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 EZH2Q15910 746 aaKnown RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 PKN2Q16513 984 aaKnown RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 Q3ZCU0 254 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 C6orf132Q5T0Z8 1188 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 MAP3K21Q5TCX8 1036 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 TATDN1Q6P1N9 297 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 FAM171BQ6P995 826 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ABRAXAS1Q6UWZ7 409 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CEP68Q76N32 757 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 RTL10Q7L3V2 364 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 NLRP10Q86W26 655 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 NATD1Q8N6N6 113 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ENAHQ8N8S7 591 aaPredicted RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 MLKLQ8NB16 471 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 EXD1Q8NHP7 514 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CDC26Q8NHZ8 85 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CDCA5Q96FF9 252 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 RBM18Q96H35 190 aaKnown RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 SEC16BQ96JE7 1060 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ARL5BQ96KC2 179 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 TNIP3Q96KP6 325 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CCDC138Q96M89 665 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 SEC62Q99442 399 aaKnown RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 IMPG2Q9BZV3 1241 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 CDH19Q9H159 772 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ADNPQ9H2P0 1102 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 FANCEQ9HB96 536 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 PCDH12Q9NPG4 1184 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 C9orf78Q9NZ63 289 aaPredicted RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 TNFRSF10DQ9UBN6 386 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ZNF69Q9UC07 566 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 KCNN3Q9UGI6 736 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 KLHL3Q9UH77 587 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 ZNHIT2Q9UHR6 403 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 MOSPD1Q9UJG1 213 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 LAMP5Q9UJQ1 280 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 FAF1Q9UNN5 650 aaPredicted RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 DNM3Q9UQ16 869 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 TBC1D30Q9Y2I9 924 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 MAFBQ9Y5Q3 323 aaPredicted RBP6.96□□□□□ -1.3
MCF2-205ENST00000437564 SNX8Q9Y5X2 465 aa6.96□□□□□ -1.3
MCF2-205ENST00000437564 FMN1Q68DA7 1419 aa6.95□□□□□ -1.3
MCF2-205ENST00000437564 MOXD2PA6NHM9 499 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms