RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 NHEJ1Q9H9Q4 299 aaPredicted RBP23.06■■□□□ 1.28
PTPRF-207ENST00000436724 VTA1Q9NP79 307 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 CEP72Q9P209 647 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 ARHGAP28Q9P2N2 729 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 ZNF215Q9UL58 517 aaPredicted RBP23.06■■□□□ 1.28
PTPRF-207ENST00000436724 REXO2Q9Y3B8 237 aaKnown RBP23.06■■□□□ 1.28
PTPRF-207ENST00000436724 ABL1P00519 1130 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 ARL2P36404 184 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 BFSP1Q12934 665 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 MYBPC2Q14324 1141 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 CBWD6Q4V339 395 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 CBWD3Q5JTY5 395 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 CBWD5Q5RIA9 395 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 ZNF467Q7Z7K2 595 aaPredicted RBP23.06■■□□□ 1.28
PTPRF-207ENST00000436724 XXYLT1Q8NBI6 393 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 IRX2Q9BZI1 471 aaPredicted RBP23.06■■□□□ 1.28
PTPRF-207ENST00000436724 GANQ9H2C0 597 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 EXOC7Q9UPT5 735 aa23.06■■□□□ 1.28
PTPRF-207ENST00000436724 ADGRA2Q96PE1 1338 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 ZBTB42B2RXF5 422 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 FANCGO15287 622 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 HNRNPH3P31942 346 aaKnown RBP23.05■■□□□ 1.28
PTPRF-207ENST00000436724 PLCB4Q15147 1175 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 PDXDC1Q6P996 788 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 TRAPPC12Q8WVT3 735 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 BBXQ8WY36 941 aaPredicted RBP23.05■■□□□ 1.28
PTPRF-207ENST00000436724 HVCN1Q96D96 273 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 SAAL1Q96ER3 474 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 GCNT4Q9P109 453 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 ARHGAP20Q9P2F6 1191 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 PASKQ96RG2 1323 aa23.05■■□□□ 1.28
PTPRF-207ENST00000436724 LRRIQ4A6NIV6 560 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 RFC5P40937 340 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 PLPPR4Q7Z2D5 763 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 ATP8B4Q8TF62 1192 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 CGNQ9P2M7 1197 aaKnown RBP23.04■■□□□ 1.28
PTPRF-207ENST00000436724 EMSYQ7Z589 1322 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 TULP1O00294 542 aaPredicted RBP23.04■■□□□ 1.28
PTPRF-207ENST00000436724 HNRNPDLO14979 420 aaKnown RBP23.04■■□□□ 1.28
PTPRF-207ENST00000436724 MAFO75444 373 aaPredicted RBP23.04■■□□□ 1.28
PTPRF-207ENST00000436724 FMO5P49326 533 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 ETF1P62495 437 aaKnown RBP23.04■■□□□ 1.28
PTPRF-207ENST00000436724 ZBTB10Q96DT7 871 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 FAM167AQ96KS9 214 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 TINF2Q9BSI4 451 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 SUGCTQ9HAC7 445 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 TFR2Q9UP52 801 aa23.04■■□□□ 1.28
PTPRF-207ENST00000436724 GBP6Q6ZN66 633 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 CBWD2Q8IUF1 395 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 PLEKHO2Q8TD55 490 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 TMEM174Q8WUU8 243 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 EDEM3Q9BZQ6 932 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 DNAI1Q9UI46 699 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 ADRB2P07550 413 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 SLC10A3P09131 477 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 PPP2R5AQ15172 486 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 IFNL1Q8IU54 200 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 LRRC71Q8N4P6 559 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 AFG1LQ8WV93 481 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 RNPEPQ9H4A4 650 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 SMARCAD1Q9H4L7 1026 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 SIX2Q9NPC8 291 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 TRPC6Q9Y210 931 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 FHOD1Q9Y613 1164 aa23.03■■□□□ 1.28
PTPRF-207ENST00000436724 RBM47A0AV96 593 aaKnown RBP23.02■■□□□ 1.28
PTPRF-207ENST00000436724 GOLGA6L9A6NEM1 432 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 TLR2O60603 784 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 UCHL3P15374 230 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 NAMPTP43490 491 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 LAMC2Q13753 1193 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 KLHDC7AQ5VTJ3 777 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 GJB7Q6PEY0 223 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 BICD1Q96G01 975 aa23.02■■□□□ 1.28
PTPRF-207ENST00000436724 AJAP1Q9UKB5 411 aaPredicted RBP23.02■■□□□ 1.28
PTPRF-207ENST00000436724 SLC15A5A6NIM6 579 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 GH1P01241 217 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 KRT13P13646 458 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 SNRPFP62306 86 aaKnown RBP23.01■■□□□ 1.27
PTPRF-207ENST00000436724 CDK17Q00537 523 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 MKRN4PQ13434 485 aaPredicted RBP23.01■■□□□ 1.27
PTPRF-207ENST00000436724 CAPSQ13938 189 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 INTS8Q75QN2 995 aaKnown RBP23.01■■□□□ 1.27
PTPRF-207ENST00000436724 DEPTORQ8TB45 409 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 PRPF31Q8WWY3 499 aaKnown RBP23.01■■□□□ 1.27
PTPRF-207ENST00000436724 POMGNT1Q8WZA1 660 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 ZIC5Q96T25 663 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 PLCB1Q9NQ66 1216 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 ZHX1Q9UKY1 873 aaPredicted RBP23.01■■□□□ 1.27
PTPRF-207ENST00000436724 FAM155AB1AL88 458 aaPredicted RBP23.01■■□□□ 1.27
PTPRF-207ENST00000436724 VAMP7P51809 220 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 CYP27A1Q02318 531 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 ARID5AQ03989 594 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 RAPGEF1Q13905 1077 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 SNRNP35Q16560 246 aaKnown RBP23.01■■□□□ 1.27
PTPRF-207ENST00000436724 WDR24Q96S15 920 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 L2HGDHQ9H9P8 463 aa23.01■■□□□ 1.27
PTPRF-207ENST00000436724 GTPBP10A4D1E9 387 aaKnown RBP23■■□□□ 1.27
PTPRF-207ENST00000436724 ADCY6O43306 1168 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 LGALS2P05162 132 aa23■■□□□ 1.27
PTPRF-207ENST00000436724 SMPD1P17405 629 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms