RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 APOL5Q9BWW9 433 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 VN1R3Q9BXE9 311 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CYP26B1Q9NR63 512 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 AGPAT5Q9NUQ2 364 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 WRAP73Q9P2S5 460 aaPredicted RBP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 DDX25Q9UHL0 483 aaKnown RBP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PIN4Q9Y237 131 aaKnown RBP12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NR2E1Q9Y466 385 aa12.3□□□□□ -0.44
SPTLC1P4-201ENST00000435997 MYH9P35579 1960 aaKnown RBP12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NT5C1B-RDH14C9J2C7 533 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 OFD1O75665 1012 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 GALTP07902 379 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SKIP12755 728 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SSRP1Q08945 709 aaKnown RBP12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NOMO2Q5JPE7 1267 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PLA2G4FQ68DD2 849 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TWF2Q6IBS0 349 aaKnown RBP12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 KIAA1841Q6NSI8 718 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 GLB1LQ6UWU2 654 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 RHPN2Q8IUC4 686 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 LPPQ93052 612 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 TM6SF1Q9BZW5 370 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 INO80BQ9C086 356 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NRDE2Q9H7Z3 1164 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 DZANK1Q9NVP4 752 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SUCLA2Q9P2R7 463 aaPredicted RBP12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PPME1Q9Y570 386 aa12.29□□□□□ -0.44
SPTLC1P4-201ENST00000435997 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PDGFBP01127 241 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SP100P23497 879 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 AVPR2P30518 371 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 HOXA11P31270 313 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 DNM2P50570 870 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NUBP1P53384 320 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SPIRE1Q08AE8 756 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 MTMR3Q13615 1198 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 GIT2Q14161 759 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NONOQ15233 471 aaKnown RBP eCLIP12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PTPN14Q15678 1187 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 INF2Q27J81 1249 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PPP4R3AQ6IN85 833 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CES5AQ6NT32 575 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 AGMOQ6ZNB7 445 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 KRT25Q7Z3Z0 450 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 KSR1Q8IVT5 923 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 UBALD2Q8IYN6 164 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 KREMEN2Q8NCW0 462 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SLC22A17Q8WUG5 538 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 RIPOR3Q96MK2 946 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 FAM20AQ96MK3 541 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 NLRP4Q96MN2 994 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 JPH2Q9BR39 696 aaPredicted RBP12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 SORCS3Q9UPU3 1222 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 USTQ9Y2C2 406 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 STK36Q9NRP7 1315 aa12.28□□□□□ -0.44
SPTLC1P4-201ENST00000435997 CPLX1O14810 134 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 INPPL1O15357 1258 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 LILRB3O75022 631 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 BRD1O95696 1058 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 GCFC2P16383 781 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 EPCAMP16422 314 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 MTHFRP42898 656 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 QARSP47897 775 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 SLC11A1P49279 550 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 NPEPPSP55786 919 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 BMS1Q14692 1282 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 UBXN11Q5T124 520 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 CATSPER4Q7RTX7 472 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 MRPL10Q7Z7H8 261 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 ZDHHC14Q8IZN3 488 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 FEZF2Q8TBJ5 459 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 AUTS2Q8WXX7 1259 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 HAS1Q92839 578 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 MINDY3Q9H8M7 445 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 DNAJB4Q9UDY4 337 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 PCDHB2Q9Y5E7 798 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 CYP46A1Q9Y6A2 500 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 WDR81Q562E7 1941 aa12.27□□□□□ -0.45
SPTLC1P4-201ENST00000435997 DDX11L8A8MPP1 907 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 TBX3O15119 743 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 GAS2O43903 313 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 CXCL14O95715 111 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 EFEMP2O95967 443 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 P4HBP07237 508 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 AFF1P51825 1210 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 SCRN1Q12765 414 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 LETM2Q2VYF4 491 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 RARS2Q5T160 578 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 SRGAP1Q7Z6B7 1085 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 NEK8Q86SG6 692 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 ZNF280BQ86YH2 543 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 C4orf19Q8IY42 314 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 RNF168Q8IYW5 571 aaPredicted RBP12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 TDRD5Q8NAT2 981 aaKnown RBP12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 SLC7A3Q8WY07 619 aa12.26□□□□□ -0.45
SPTLC1P4-201ENST00000435997 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms