RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CORO7P57737 925 aa17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TKFCQ3LXA3 575 aa17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 DNAJC21Q5F1R6 531 aaKnown RBP17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PALB2Q86YC2 1186 aa17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ATP6V1G3Q96LB4 118 aa17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 CARD9Q9H257 536 aa17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 NEUROG2Q9H2A3 272 aa17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TAS2R14Q9NYV8 317 aa17.43■□□□□ 0.38
HLA-DQB2-231ENST00000435145 HMGB1P1B2RPK0 211 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 NFIBO00712 420 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TRIM66O15016 1216 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ASNSP08243 561 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 HSD17B3P37058 310 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 SNRPFP62306 86 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 DLG4P78352 724 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 UAP1Q16222 522 aaPredicted RBP17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PCNX4Q63HM2 1172 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 MIGA2Q7L4E1 593 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 LRRC45Q96CN5 670 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ACCSQ96QU6 501 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 AGPAT1Q99943 283 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PLAAQ9Y263 795 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 DDX39AO00148 427 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 VAMP7P51809 220 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 MRPS9P82933 396 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PPP3CAQ08209 521 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 HLTFQ14527 1009 aaKnown RBP eCLIP17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TNIP1Q15025 636 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 MAATS1Q7Z4T9 603 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 RTKN2Q8IZC4 609 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 CCDC26Q8TAB7 109 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 THAP2Q9H0W7 228 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 VEZTQ9HBM0 779 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TMBIM4Q9HC24 238 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 AMACRQ9UHK6 382 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 COG5Q9UP83 839 aa17.42■□□□□ 0.38
HLA-DQB2-231ENST00000435145 EMSYQ7Z589 1322 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ZEB2O60315 1214 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 QARSP47897 775 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 GTF2BQ00403 316 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 SPP2Q13103 211 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ARHGAP44Q17R89 818 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 KCTD16Q68DU8 428 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 DDX42Q86XP3 938 aaKnown RBP eCLIP17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 MCF2L2Q86YR7 1114 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PRPF38AQ8NAV1 312 aaKnown RBP17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 FBXO41Q8TF61 875 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 CBWD1Q9BRT8 395 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TIPINQ9BVW5 301 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 RASSF4Q9H2L5 321 aa17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ZBTB12Q9Y330 459 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TISP43B9A030 160 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 FGGP02679 453 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ABCB4P21439 1286 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PTENP60484 403 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PPP2R5EQ16537 467 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 C11orf63Q6NUN7 778 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 ARHGEF19Q8IW93 802 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 RHOT2Q8IXI1 618 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 SAMD3Q8N6K7 520 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 RDH13Q8NBN7 331 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 MAP3K20Q9NYL2 800 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 WDR46O15213 610 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 NR1D1P20393 614 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 XXYLT1Q8NBI6 393 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 BCAS4Q8TDM0 211 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 SYTL5Q8TDW5 730 aaPredicted RBP17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 SLC20A1Q8WUM9 679 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 RNPC3Q96LT9 517 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 UBE2TQ9NPD8 197 aaPredicted RBP17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 HSPBP1Q9NZL4 362 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 NR2E1Q9Y466 385 aa17.4■□□□□ 0.38
HLA-DQB2-231ENST00000435145 PFASO15067 1338 aa17.39■□□□□ 0.38
HLA-DQB2-231ENST00000435145 TTI1O43156 1089 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 DAPK3O43293 454 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 LRRN2O75325 713 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 CCT5P48643 541 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 NCKAP1LP55160 1127 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 CETN1Q12798 172 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 PDCLQ13371 301 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 CLUL1Q15846 466 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 C4orf19Q8IY42 314 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 C10orf67Q8IYJ2 551 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 TTLL6Q8N841 843 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 LPAR1Q92633 364 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 ZNF341Q9BYN7 854 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 VPS33BQ9H267 617 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 PCIF1Q9H4Z3 704 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 FAM114A2Q9NRY5 505 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 TBC1D22BQ9NU19 505 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 PKD2L1Q9P0L9 805 aa17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 ASTN2O75129 1339 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB2-231ENST00000435145 SRRM3A6NNA2 597 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB2-231ENST00000435145 MTA2O94776 668 aa17.38■□□□□ 0.37
HLA-DQB2-231ENST00000435145 MAGEA9P43362 315 aa17.38■□□□□ 0.37
HLA-DQB2-231ENST00000435145 MTMR3Q13615 1198 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms