RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ALAS1P13196 640 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 DAAM2Q86T65 1068 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 HES6Q96HZ4 224 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 RUFY1Q96T51 708 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 GINM1Q9NU53 330 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 HACL1Q9UJ83 578 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 TMCO5BA8MYB1 307 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 CCDC188H7C350 402 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 PLS1Q14651 629 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 PHLDB3Q6NSJ2 640 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 KLHL7Q8IXQ5 586 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 IFT81Q8WYA0 676 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 VTI1AQ96AJ9 217 aa20.17■□□□□ 0.82
CLK1-205ENST00000434813 ZNF541Q9H0D2 1346 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 MAPK13O15264 365 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 FAM153BP0C7A2 387 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 SPP2Q13103 211 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 FAM153CQ494X1 144 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 MAEAQ7L5Y9 396 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 CPXCR1Q8N123 301 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 CTNNBL1Q8WYA6 563 aaPredicted RBP20.16■□□□□ 0.82
CLK1-205ENST00000434813 TEPSINQ96N21 525 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 RAVER2Q9HCJ3 691 aaKnown RBP20.16■□□□□ 0.82
CLK1-205ENST00000434813 FAM153AQ9UHL3 310 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 SAMM50Q9Y512 469 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 ASTN2O75129 1339 aaPredicted RBP20.16■□□□□ 0.82
CLK1-205ENST00000434813 EMSYQ7Z589 1322 aa20.16■□□□□ 0.82
CLK1-205ENST00000434813 YWHABP31946 246 aaKnown RBP20.15■□□□□ 0.82
CLK1-205ENST00000434813 VAMP7P51809 220 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 SNRPFP62306 86 aaKnown RBP20.15■□□□□ 0.82
CLK1-205ENST00000434813 GTF2BQ00403 316 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 LRRC31Q6UY01 552 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 ZIM3Q96PE6 472 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 ISCUQ9H1K1 167 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 TAF1DQ9H5J8 278 aaPredicted RBP20.15■□□□□ 0.82
CLK1-205ENST00000434813 IGSF9BQ9UPX0 1349 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 BHMG1C9JSJ3 638 aaPredicted RBP20.15■□□□□ 0.82
CLK1-205ENST00000434813 DLG4P78352 724 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 PPATQ06203 517 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 CETN1Q12798 172 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 CUL1Q13616 776 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 PGM5Q15124 567 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 PTPROQ16827 1216 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 EPC2Q52LR7 807 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 C4orf19Q8IY42 314 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 XXYLT1Q8NBI6 393 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 RDH13Q8NBN7 331 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 SLC35G2Q8TBE7 412 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 CBWD1Q9BRT8 395 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 OSGEPQ9NPF4 335 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 AMFRQ9UKV5 643 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 PNMA2Q9UL42 364 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 PPP1R9AQ9ULJ8 1098 aa20.15■□□□□ 0.82
CLK1-205ENST00000434813 TTC7AQ9ULT0 858 aaPredicted RBP20.15■□□□□ 0.82
CLK1-205ENST00000434813 TISP43B9A030 160 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 BUB1BO60566 1050 aaPredicted RBP20.14■□□□□ 0.81
CLK1-205ENST00000434813 EIF2AK2P19525 551 aaKnown RBP20.14■□□□□ 0.81
CLK1-205ENST00000434813 JAK3P52333 1124 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 RPS6P62753 249 aaKnown RBP20.14■□□□□ 0.81
CLK1-205ENST00000434813 ERVK-9P63128 1117 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 ARHGAP44Q17R89 818 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 IQCKQ8N0W5 287 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 CCDC43Q96MW1 224 aaKnown RBP20.14■□□□□ 0.81
CLK1-205ENST00000434813 IWS1Q96ST2 819 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 PLEKHA4Q9H4M7 779 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 PCIF1Q9H4Z3 704 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 HOMER2Q9NSB8 354 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 TNFAIP3P21580 790 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 NCKAP1LP55160 1127 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 PPP3CAQ08209 521 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 TTMPQ5BVD1 217 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 CFAP58Q5T655 872 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 HAUS6Q7Z4H7 955 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 SLC17A8Q8NDX2 589 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 TAAR1Q96RJ0 339 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 HSPBP1Q9NZL4 362 aa20.14■□□□□ 0.81
CLK1-205ENST00000434813 PARP14Q460N5 1801 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 ANKRD62A6NC57 917 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 FOXN3O00409 490 aaPredicted RBP20.13■□□□□ 0.81
CLK1-205ENST00000434813 KRIT1O00522 736 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 PMM2O15305 246 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 LRRN2O75325 713 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 UGCGQ16739 394 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 C1orf220Q5T0J3 134 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 AGPAT1Q99943 283 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 AP1M1Q9BXS5 423 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 SLITRK6Q9H5Y7 841 aa20.13■□□□□ 0.81
CLK1-205ENST00000434813 DIS3Q9Y2L1 958 aaKnown RBP20.13■□□□□ 0.81
CLK1-205ENST00000434813 WDR64B1ANS9 1081 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 BACH1O14867 736 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 SART1O43290 800 aaKnown RBP20.12■□□□□ 0.81
CLK1-205ENST00000434813 CTNND1O60716 968 aaKnown RBP20.12■□□□□ 0.81
CLK1-205ENST00000434813 VCAM1P19320 739 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 ABCB4P21439 1286 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 ECHS1P30084 290 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 SFNP31947 248 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 HSPA9P38646 679 aaKnown RBP20.12■□□□□ 0.81
CLK1-205ENST00000434813 GUCY2FP51841 1108 aa20.12■□□□□ 0.81
CLK1-205ENST00000434813 HADHBP55084 474 aaKnown RBP20.12■□□□□ 0.81
CLK1-205ENST00000434813 MCCD1P59942 119 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms