RNA–Protein interactions for RNA: ENST00000434517.1

TOP3B-205, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-205ENST00000434517 GIT2Q14161 759 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 DDX12PQ92771 950 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 STAMQ92783 540 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 COL25A1Q9BXS0 654 aaPredicted RBP23.67■■□□□ 1.38
TOP3B-205ENST00000434517 FTHL17Q9BXU8 183 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 C2orf40Q9H1Z8 148 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 GOLPH3LQ9H4A5 285 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 C17orf75Q9HAS0 396 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 SERTAD1Q9UHV2 236 aa23.67■■□□□ 1.38
TOP3B-205ENST00000434517 FAM237AA0A1B0GTK4 181 aa23.66■■□□□ 1.38
TOP3B-205ENST00000434517 IFNLR1Q8IU57 520 aaPredicted RBP23.66■■□□□ 1.38
TOP3B-205ENST00000434517 NFKBIZQ9BYH8 718 aa23.66■■□□□ 1.38
TOP3B-205ENST00000434517 MINDY3Q9H8M7 445 aa23.66■■□□□ 1.38
TOP3B-205ENST00000434517 CXXC1Q9P0U4 656 aaPredicted RBP23.66■■□□□ 1.38
TOP3B-205ENST00000434517 LARSQ9P2J5 1176 aaKnown RBP23.66■■□□□ 1.38
TOP3B-205ENST00000434517 USP25Q9UHP3 1055 aa23.66■■□□□ 1.38
TOP3B-205ENST00000434517 SLC4A7Q9Y6M7 1214 aa23.66■■□□□ 1.38
TOP3B-205ENST00000434517 DENND3A2RUS2 1198 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 ERLIN2O94905 339 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 PLS3P13797 630 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 CDCA2Q69YH5 1023 aaPredicted RBP23.65■■□□□ 1.38
TOP3B-205ENST00000434517 MYCT1Q8N699 235 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 TMEM87AQ8NBN3 555 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 KIFC3Q9BVG8 833 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 TMX1Q9H3N1 280 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 PARVGQ9HBI0 331 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 KMT5AQ9NQR1 393 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 KBTBD4Q9NVX7 518 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 KCNG1Q9UIX4 513 aa23.65■■□□□ 1.38
TOP3B-205ENST00000434517 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.64■■□□□ 1.37
TOP3B-205ENST00000434517 SLFN14P0C7P3 912 aa23.64■■□□□ 1.37
TOP3B-205ENST00000434517 ZSCAN20P17040 1043 aaPredicted RBP23.64■■□□□ 1.37
TOP3B-205ENST00000434517 LIG1P18858 919 aa23.64■■□□□ 1.37
TOP3B-205ENST00000434517 NPTX2P47972 431 aa23.64■■□□□ 1.37
TOP3B-205ENST00000434517 SMTNP53814 917 aa23.64■■□□□ 1.37
TOP3B-205ENST00000434517 WDR5P61964 334 aaKnown RBP23.64■■□□□ 1.37
TOP3B-205ENST00000434517 MBTD1Q05BQ5 628 aa23.64■■□□□ 1.37
TOP3B-205ENST00000434517 LRIT3Q3SXY7 679 aa23.64■■□□□ 1.37
TOP3B-205ENST00000434517 ACTN4O43707 911 aaKnown RBP23.63■■□□□ 1.37
TOP3B-205ENST00000434517 AMHP03971 560 aa23.63■■□□□ 1.37
TOP3B-205ENST00000434517 IDEP14735 1019 aa23.63■■□□□ 1.37
TOP3B-205ENST00000434517 AFMP43652 599 aa23.63■■□□□ 1.37
TOP3B-205ENST00000434517 NCBP1Q09161 790 aaKnown RBP23.63■■□□□ 1.37
TOP3B-205ENST00000434517 PCBP1Q15365 356 aaKnown RBP eCLIP23.63■■□□□ 1.374e-8■■■□□ 18.2
TOP3B-205ENST00000434517 LONRF3Q496Y0 759 aa23.63■■□□□ 1.37
TOP3B-205ENST00000434517 RASIP1Q5U651 963 aa23.63■■□□□ 1.37
TOP3B-205ENST00000434517 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.63■■□□□ 1.37
TOP3B-205ENST00000434517 FAM43BQ6ZT52 329 aaPredicted RBP23.63■■□□□ 1.37
TOP3B-205ENST00000434517 GBP4Q96PP9 640 aa23.63■■□□□ 1.37
TOP3B-205ENST00000434517 PRMT7Q9NVM4 692 aaPredicted RBP23.63■■□□□ 1.37
TOP3B-205ENST00000434517 MTMR10Q9NXD2 777 aa23.63■■□□□ 1.37
TOP3B-205ENST00000434517 PIN4Q9Y237 131 aaKnown RBP23.63■■□□□ 1.37
TOP3B-205ENST00000434517 ADGRA3Q8IWK6 1321 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 SLC16A4O15374 487 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 MGEA5O60502 916 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 GADD45BO75293 160 aaPredicted RBP23.62■■□□□ 1.37
TOP3B-205ENST00000434517 ZNF202O95125 648 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 IBSPP21815 317 aaPredicted RBP23.62■■□□□ 1.37
TOP3B-205ENST00000434517 ZNF131P52739 623 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 EFNA5P52803 228 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 MAPK6Q16659 721 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 MYOCDQ8IZQ8 938 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 CNNM3Q8NE01 707 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 SPIRE2Q8WWL2 714 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 DNAJC19Q96DA6 116 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 SLC9A7Q96T83 725 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 ADAM2Q99965 735 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 AGPAT5Q9NUQ2 364 aa23.62■■□□□ 1.37
TOP3B-205ENST00000434517 PTPRSQ13332 1948 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.61■■□□□ 1.37
TOP3B-205ENST00000434517 ENPP3O14638 875 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 PRPF40AO75400 957 aaKnown RBP23.61■■□□□ 1.37
TOP3B-205ENST00000434517 PRKCBP05771 671 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 ASIC1P78348 528 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 DEFB103AP81534 67 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 TMEM132AQ24JP5 1023 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 CLEC17AQ6ZS10 378 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 CCDC65Q8IXS2 484 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 GRAMD1CQ8IYS0 662 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 LINC01599Q8WXQ3 324 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 PAGE5Q96GU1 130 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 TRIM9Q9C026 710 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 TSPYL2Q9H2G4 693 aaPredicted RBP23.61■■□□□ 1.37
TOP3B-205ENST00000434517 CHST12Q9NRB3 414 aa23.61■■□□□ 1.37
TOP3B-205ENST00000434517 PHLPP2Q6ZVD8 1323 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 UNC80Q8N2C7 3258 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 H0YCG3 227 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 K7ENM7 598 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 K7ERI5 159 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 TRAK2O60296 914 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 TSPAN1O60635 241 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 ATP2A2P16615 1042 aaKnown RBP23.6■■□□□ 1.37
TOP3B-205ENST00000434517 GAP43P17677 238 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 FAM160A1Q05DH4 1040 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 TWF2Q6IBS0 349 aaKnown RBP23.6■■□□□ 1.37
TOP3B-205ENST00000434517 KRBA2Q6ZNG9 492 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 Q7L0L9 218 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 RTN4RL1Q86UN2 441 aaPredicted RBP23.6■■□□□ 1.37
TOP3B-205ENST00000434517 FAM178BQ8IXR5 827 aa23.6■■□□□ 1.37
TOP3B-205ENST00000434517 CCDC34Q96HJ3 373 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms