RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 PPP1R12AO14974 1030 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-205ENST00000433888 RANGAP1P46060 587 aaPredicted RBP5.74□□□□□ -1.49
PTPN4-205ENST00000433888 ADCY2Q08462 1091 aa5.74□□□□□ -1.49
PTPN4-205ENST00000433888 KRT40Q6A162 431 aa5.74□□□□□ -1.49
PTPN4-205ENST00000433888 KIAA1841Q6NSI8 718 aa5.74□□□□□ -1.49
PTPN4-205ENST00000433888 PHYKPLQ8IUZ5 450 aa5.74□□□□□ -1.49
PTPN4-205ENST00000433888 MYL10Q9BUA6 226 aa5.74□□□□□ -1.49
PTPN4-205ENST00000433888 OSBPL2Q9H1P3 480 aa5.74□□□□□ -1.49
PTPN4-205ENST00000433888 MTG2Q9H4K7 406 aa5.74□□□□□ -1.49
PTPN4-205ENST00000433888 C14orf93Q9H972 538 aaKnown RBP5.74□□□□□ -1.49
PTPN4-205ENST00000433888 GOLGA6L6A8MZA4 724 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 OPHN1O60890 802 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 RFPL3O75679 317 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 JMJD7P0C870 316 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 ADRA1BP35368 520 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 ZNF276Q8N554 614 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 RTF1Q92541 710 aaKnown RBP5.73□□□□□ -1.49
PTPN4-205ENST00000433888 PGBD4Q96DM1 585 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 ZMAT4Q9H898 229 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 OXSMQ9NWU1 459 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 HS3ST4Q9Y661 456 aa5.73□□□□□ -1.49
PTPN4-205ENST00000433888 IPO13O94829 963 aaKnown RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 GAAP10253 952 aa5.72□□□□□ -1.49
PTPN4-205ENST00000433888 ATP2A2P16615 1042 aaKnown RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 ZFP36P26651 326 aaKnown RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 PTTG1IPP53801 180 aa5.72□□□□□ -1.49
PTPN4-205ENST00000433888 DCAF17Q5H9S7 520 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 MBNL2Q5VZF2 373 aaKnown RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 APBB1IPQ7Z5R6 666 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 CXorf67Q86X51 503 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 MB21D1Q8N884 522 aa5.72□□□□□ -1.49
PTPN4-205ENST00000433888 ST8SIA2Q92186 375 aa5.72□□□□□ -1.49
PTPN4-205ENST00000433888 H2AFY2Q9P0M6 372 aaPredicted RBP5.72□□□□□ -1.49
PTPN4-205ENST00000433888 SYNPO2Q9UMS6 1093 aa5.72□□□□□ -1.49
PTPN4-205ENST00000433888 FZD1Q9UP38 647 aa5.72□□□□□ -1.49
PTPN4-205ENST00000433888 FAM83GA6ND36 823 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 ELL2O00472 640 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-205ENST00000433888 HOXA3O43365 443 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-205ENST00000433888 NPEPPSP55786 919 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 MAN2A1Q16706 1144 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 CFAP100Q494V2 611 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 TIGD7Q6NT04 549 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-205ENST00000433888 UBE2R2Q712K3 238 aaPredicted RBP5.71□□□□□ -1.5
PTPN4-205ENST00000433888 PIK3C3Q8NEB9 887 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 ARL8AQ96BM9 186 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 NOL10Q9BSC4 688 aaKnown RBP5.71□□□□□ -1.5
PTPN4-205ENST00000433888 MLST8Q9BVC4 326 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 POFUT1Q9H488 388 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 ING3Q9NXR8 418 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 NCDNQ9UBB6 729 aa5.71□□□□□ -1.5
PTPN4-205ENST00000433888 FSBPO95073 299 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 CFBP00751 764 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 GCP02774 474 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 FLT3P36888 993 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 FSTL1Q12841 308 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 PABPC4Q13310 644 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTPN4-205ENST00000433888 SF3A1Q15459 793 aaKnown RBP5.7□□□□□ -1.5
PTPN4-205ENST00000433888 NFE2L2Q16236 605 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 KIF18BQ86Y91 864 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 VRK3Q8IV63 474 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 C7orf31Q8N865 590 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 GPR150Q8NGU9 434 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 SH3TC2Q8TF17 1288 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 CRAMP1Q96RY5 1269 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 DNAJC2Q99543 621 aaKnown RBP5.7□□□□□ -1.5
PTPN4-205ENST00000433888 TOMM22Q9NS69 142 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 TMEM260Q9NX78 707 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 MYPNQ86TC9 1320 aa5.7□□□□□ -1.5
PTPN4-205ENST00000433888 MAFGO15525 162 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 TGM5O43548 720 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 APOL3O95236 402 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 F2P00734 622 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 ITGB1P05556 798 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 CD69Q07108 199 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 LRRC32Q14392 662 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 FAM214AQ32MH5 1076 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 METTL24Q5JXM2 366 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 ZZZ3Q8IYH5 903 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 UNC5BQ8IZJ1 945 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 UIMC1Q96RL1 719 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 PDCD2LQ9BRP1 358 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 MTFR1LQ9H019 292 aa5.69□□□□□ -1.5
PTPN4-205ENST00000433888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.69□□□□□ -1.5
PTPN4-205ENST00000433888 GRID2IPA4D2P6 1211 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 ASMTLO95671 621 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 GNAT2P19087 354 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 HK1P19367 917 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 DSG1Q02413 1049 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 BMS1Q14692 1282 aaKnown RBP5.68□□□□□ -1.5
PTPN4-205ENST00000433888 ZNF496Q96IT1 587 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-205ENST00000433888 HIST1H2AHQ96KK5 128 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 HIST1H2AJQ99878 128 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 ZNF768Q9H5H4 540 aaKnown RBP5.68□□□□□ -1.5
PTPN4-205ENST00000433888 INTS7Q9NVH2 962 aaKnown RBP5.68□□□□□ -1.5
PTPN4-205ENST00000433888 MAGEC2Q9UBF1 373 aaPredicted RBP5.68□□□□□ -1.5
PTPN4-205ENST00000433888 SORCS3Q9UPU3 1222 aa5.68□□□□□ -1.5
PTPN4-205ENST00000433888 AHRRA9YTQ3 701 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 ALDH1A2O94788 518 aa5.67□□□□□ -1.5
PTPN4-205ENST00000433888 SEC24DO94855 1032 aaPredicted RBP5.67□□□□□ -1.5
PTPN4-205ENST00000433888 POU3F2P20265 443 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms