RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 MEFVO15553 781 aaPredicted RBP12.15□□□□□ -0.46
SEC16A-206ENST00000431893 PCCAP05165 728 aaPredicted RBP12.15□□□□□ -0.46
SEC16A-206ENST00000431893 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
SEC16A-206ENST00000431893 MAP3K7CLP57077 242 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 CCDC92Q53HC0 331 aaPredicted RBP12.15□□□□□ -0.46
SEC16A-206ENST00000431893 SLC17A8Q8NDX2 589 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 RCOR1Q9UKL0 485 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 UBE4BO95155 1302 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 NEDD4P46934 1319 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 STK25O00506 426 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 OSBPP22059 807 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 VPS39Q96JC1 886 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 ATP11BQ9Y2G3 1177 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 K7ERI5 159 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 UBTFL6P0CB48 400 aaPredicted RBP12.15□□□□□ -0.46
SEC16A-206ENST00000431893 KRT4P19013 534 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 ANO5Q75V66 913 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 ZNF280CQ8ND82 737 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 USP6NLQ92738 828 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 INPP5DQ92835 1189 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 KDM5AP29375 1690 aaKnown RBP12.15□□□□□ -0.46
SEC16A-206ENST00000431893 MAP3K15Q6ZN16 1313 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 NPHP3-ACAD11A0A0J9YXS1 232 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 MYO1GB0I1T2 1018 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 NBNO60934 754 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 KCNA2P16389 499 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 NFX1Q12986 1120 aaKnown RBP12.15□□□□□ -0.46
SEC16A-206ENST00000431893 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
SEC16A-206ENST00000431893 PP2D1A8MPX8 630 aa12.15□□□□□ -0.47
SEC16A-206ENST00000431893 GPC5P78333 572 aa12.15□□□□□ -0.47
SEC16A-206ENST00000431893 PSMD2Q13200 908 aa12.15□□□□□ -0.47
SEC16A-206ENST00000431893 DYNC1I2Q13409 638 aaKnown RBP12.15□□□□□ -0.47
SEC16A-206ENST00000431893 ZNF699Q32M78 642 aa12.15□□□□□ -0.47
SEC16A-206ENST00000431893 ACCSLQ4AC99 568 aa12.15□□□□□ -0.47
SEC16A-206ENST00000431893 FAM118BQ9BPY3 351 aa12.15□□□□□ -0.47
SEC16A-206ENST00000431893 DBR1Q9UK59 544 aaKnown RBP12.15□□□□□ -0.47
SEC16A-206ENST00000431893 SYNGAP1Q96PV0 1343 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 TEX33O43247 280 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 WDR47O94967 919 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 MLH1P40692 756 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 HDAC4P56524 1084 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 MTF1Q14872 753 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 GPATCH4Q5T3I0 446 aaKnown RBP12.14□□□□□ -0.47
SEC16A-206ENST00000431893 ANKRD40Q6AI12 368 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 EPAS1Q99814 870 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 CEP72Q9P209 647 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 USP17L5A8MUK1 530 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 PRPF3O43395 683 aaKnown RBP12.14□□□□□ -0.47
SEC16A-206ENST00000431893 DGKIO75912 1065 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 LCP1P13796 627 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 PGM1P36871 562 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 MTM1Q13496 603 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 PTK2BQ14289 1009 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 KIAA1755Q5JYT7 1200 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 SNRNP27Q8WVK2 155 aaKnown RBP12.14□□□□□ -0.47
SEC16A-206ENST00000431893 RUBCNLQ9H714 662 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 ROR1Q01973 937 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 CEP55Q53EZ4 464 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
SEC16A-206ENST00000431893 RHOT2Q8IXI1 618 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 CNKSR1Q969H4 720 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 SMARCAL1Q9NZC9 954 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 EHD2Q9NZN4 543 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 KRT38O76015 456 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 LONRF1Q17RB8 773 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 KLHL38Q2WGJ6 581 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 ARMCX2Q7L311 632 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 GIMAP4Q9NUV9 329 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 FOXN1O15353 648 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 NR3C1P04150 777 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 SERPIND1P05546 499 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 KRT17Q04695 432 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 LMBRD2Q68DH5 695 aaPredicted RBP12.14□□□□□ -0.47
SEC16A-206ENST00000431893 TMEM154Q6P9G4 183 aa12.14□□□□□ -0.47
SEC16A-206ENST00000431893 CCDC137Q6PK04 289 aaKnown RBP12.14□□□□□ -0.47
SEC16A-206ENST00000431893 DEPDC1Q5TB30 811 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 KIF2BQ8N4N8 673 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 SH3RF3Q8TEJ3 882 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-206ENST00000431893 GCNAQ96QF7 691 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 BRIP1Q9BX63 1249 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 KIAA0232Q92628 1395 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 FAM196BA6NMK8 535 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 FTLP02792 175 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-206ENST00000431893 PSMC5P62195 406 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 RNF219Q5W0B1 726 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-206ENST00000431893 ATP6V1G3Q96LB4 118 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 SIK2Q9H0K1 926 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 IL1RL2Q9HB29 575 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 SEL1LQ9UBV2 794 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 XPO1O14980 1071 aaKnown RBP12.13□□□□□ -0.47
SEC16A-206ENST00000431893 COASYQ13057 564 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 ZNF667Q5HYK9 610 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 IZUMO3Q5VZ72 239 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 CYB5R4Q7L1T6 521 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 OR2W6PQ8NHA6 318 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 SNF8Q96H20 258 aa12.13□□□□□ -0.47
SEC16A-206ENST00000431893 TRIM66O15016 1216 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms