RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PPP2R5AQ15172 486 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 ASIC2Q16515 512 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 SLC39A4Q6P5W5 647 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 TAS1R3Q7RTX0 852 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 PLEKHO2Q8TD55 490 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 SEPT1Q8WYJ6 367 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 SYN2Q92777 582 aaPredicted RBP18.18■□□□□ 0.5
USHBP1-203ENST00000431146 ERO1AQ96HE7 468 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 MPHOSPH6Q99547 160 aaKnown RBP18.18■□□□□ 0.5
USHBP1-203ENST00000431146 NTPCRQ9BSD7 190 aaKnown RBP18.18■□□□□ 0.5
USHBP1-203ENST00000431146 MRFAP1Q9Y605 127 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 PLXNB2O15031 1838 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 EMSYQ7Z589 1322 aa18.18■□□□□ 0.5
USHBP1-203ENST00000431146 GTPBP10A4D1E9 387 aaKnown RBP18.17■□□□□ 0.5
USHBP1-203ENST00000431146 KRT86O43790 486 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 LRRN2O75325 713 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 TFRCP02786 760 aaKnown RBP18.17■□□□□ 0.5
USHBP1-203ENST00000431146 MYL7Q01449 175 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 KLHL30Q0D2K2 578 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 MYBPC2Q14324 1141 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 IQCEQ6IPM2 695 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 CBWD2Q8IUF1 395 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 C12orf56Q8IXR9 622 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 SLC17A8Q8NDX2 589 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 ASAP3Q8TDY4 903 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 IFT74Q96LB3 600 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 C17orf75Q9HAS0 396 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 AIPL1Q9NZN9 384 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 EXOC7Q9UPT5 735 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 CTAGE9A4FU28 777 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-203ENST00000431146 VAMP7P51809 220 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 PPP3CAQ08209 521 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
USHBP1-203ENST00000431146 CELF3Q5SZQ8 465 aaKnown RBP18.17■□□□□ 0.5
USHBP1-203ENST00000431146 CEP89Q96ST8 783 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.17■□□□□ 0.5
USHBP1-203ENST00000431146 DHX33Q9H6R0 707 aaKnown RBP18.17■□□□□ 0.5
USHBP1-203ENST00000431146 MYH10P35580 1976 aa18.17■□□□□ 0.5
USHBP1-203ENST00000431146 SSU72P8A0A1W2PR75 194 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 NOP56O00567 594 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 ENC1O14682 589 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 LCA5LO95447 670 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 BRD2P25440 801 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 GCLMP48507 274 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 KIF5AQ12840 1032 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 ELF2Q15723 593 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 C1orf220Q5T0J3 134 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 INTS8Q75QN2 995 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 C2orf69Q8N8R5 385 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 GLG1Q92896 1179 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 BICD1Q96G01 975 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 MAP7D2Q96T17 732 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 GPR20Q99678 358 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 INTS2Q9H0H0 1204 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 CGNQ9P2M7 1197 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 HNRNPDLO14979 420 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 ADORA2AP29274 412 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 DRP2Q13474 957 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 SNRNP35Q16560 246 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 ERCC6LQ2NKX8 1250 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 GJC2Q5T442 439 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 FAM160B1Q5W0V3 765 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 IRF2BP2Q7Z5L9 587 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 DHX37Q8IY37 1157 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 SHCBP1Q8NEM2 672 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 SLC7A3Q8WY07 619 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 SPATA33Q96N06 139 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 NAPGQ99747 312 aaPredicted RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 NIFKQ9BYG3 293 aaKnown RBP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.16■□□□□ 0.5
USHBP1-203ENST00000431146 ARHGAP28Q9P2N2 729 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 MYO1AQ9UBC5 1043 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 ADAMTS1Q9UHI8 967 aa18.16■□□□□ 0.5
USHBP1-203ENST00000431146 CENPFP49454 3210 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 LRRIQ4A6NIV6 560 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 TXNP10599 105 aaKnown RBP18.15■□□□□ 0.5
USHBP1-203ENST00000431146 GLRA2P23416 452 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 MAGEA1P43355 309 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 RTP1P59025 263 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 CCDC62Q6P9F0 684 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 ARMCX2Q7L311 632 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 MNS1Q8NEH6 495 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 POMGNT1Q8WZA1 660 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 CCDC127Q96BQ5 260 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 HVCN1Q96D96 273 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 PTPN18Q99952 460 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 AZI2Q9H6S1 392 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 NRBP2Q9NSY0 501 aa18.15■□□□□ 0.5
USHBP1-203ENST00000431146 A0A087X0T9 212 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 FAM228BP0C875 321 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 JAM2P57087 298 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 PTK2Q05397 1052 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 ZNF662Q6ZS27 426 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 PAXIP1Q6ZW49 1069 aaPredicted RBP18.14■□□□□ 0.5
USHBP1-203ENST00000431146 AFAP1L1Q8TED9 768 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 TMEM174Q8WUU8 243 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 POP1Q99575 1024 aaKnown RBP18.14■□□□□ 0.5
USHBP1-203ENST00000431146 HDAC6Q9UBN7 1215 aa18.14■□□□□ 0.5
USHBP1-203ENST00000431146 UNCXA6NJT0 531 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms