RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 POTEGQ6S5H5 508 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 RNF149Q8NC42 400 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 MTRQ99707 1265 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 POLD4Q9HCU8 107 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 GPRC5CQ9NQ84 441 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 AGPAT5Q9NUQ2 364 aa13.95□□□□□ -0.18
SMPD4-204ENST00000430682 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 NT5C1B-RDH14C9J2C7 533 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 ZNF623O75123 536 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 GLP2RO95838 553 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 GLRA2P23416 452 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 PTENP60484 403 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 ADAM15Q13444 863 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 CLUL1Q15846 466 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 AMHR2Q16671 573 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 TWF2Q6IBS0 349 aaKnown RBP13.94□□□□□ -0.18
SMPD4-204ENST00000430682 KCNT2Q6UVM3 1135 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 AGMOQ6ZNB7 445 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 MAEAQ7L5Y9 396 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 SRGAP1Q7Z6B7 1085 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 RBM23Q86U06 439 aaKnown RBP13.94□□□□□ -0.18
SMPD4-204ENST00000430682 TMEM173Q86WV6 379 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-204ENST00000430682 POLR3CQ9BUI4 534 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-204ENST00000430682 INO80BQ9C086 356 aaPredicted RBP13.94□□□□□ -0.18
SMPD4-204ENST00000430682 FAM105AQ9NUU6 356 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 DACT1Q9NYF0 836 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 PCDHB12Q9Y5F1 795 aa13.94□□□□□ -0.18
SMPD4-204ENST00000430682 PP2D1A8MPX8 630 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 FSCN2O14926 492 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 ASAP2O43150 1006 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 ST18O60284 1047 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 TSPAN1O60635 241 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 GJB2P29033 226 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 NRIP1P48552 1158 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 MBTD1Q05BQ5 628 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 PTGDRQ13258 359 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 PTCRAQ6ISU1 281 aaPredicted RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 MRPL10Q7Z7H8 261 aaKnown RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 THNSL1Q8IYQ7 743 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 SMG8Q8ND04 991 aaKnown RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 IL27Q8NEV9 243 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 VN1R2Q8NFZ6 395 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 BCL7CQ8WUZ0 217 aaPredicted RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 TCP11Q8WWU5 503 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 BSNDQ8WZ55 320 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 CPB2Q96IY4 423 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 EIF2AQ9BY44 585 aaKnown RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 RNF39Q9H2S5 420 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 TUFT1Q9NNX1 390 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
SMPD4-204ENST00000430682 CLEC1BQ9P126 229 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 PCDHB2Q9Y5E7 798 aa13.93□□□□□ -0.18
SMPD4-204ENST00000430682 TTLL13PA6NNM8 815 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 HIDE1A8MVS5 230 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 PER2O15055 1255 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 B4GALT5O43286 388 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 HOXA2O43364 376 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 GAS2O43903 313 aaKnown RBP13.92□□□□□ -0.18
SMPD4-204ENST00000430682 OFD1O75665 1012 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 DGAT1O75907 488 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 EDN1P05305 212 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 XRCC6P12956 609 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMPD4-204ENST00000430682 LAG3P18627 525 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 RPA1P27694 616 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 CDC25AP30304 524 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 TRAPPC10P48553 1259 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 FXR2P51116 673 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMPD4-204ENST00000430682 ORC2Q13416 577 aaPredicted RBP13.92□□□□□ -0.18
SMPD4-204ENST00000430682 CDR2LQ86X02 465 aaPredicted RBP13.92□□□□□ -0.18
SMPD4-204ENST00000430682 ZNF280BQ86YH2 543 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 FAM178BQ8IXR5 827 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 SLC39A11Q8N1S5 342 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 LRRC43Q8N309 656 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 MSLNLQ96KJ4 702 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 POLR3FQ9H1D9 316 aaPredicted RBP13.92□□□□□ -0.18
SMPD4-204ENST00000430682 NRDE2Q9H7Z3 1164 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.92□□□□□ -0.18
SMPD4-204ENST00000430682 TBC1D13Q9NVG8 400 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 DNAJB4Q9UDY4 337 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 USP20Q9Y2K6 914 aa13.92□□□□□ -0.18
SMPD4-204ENST00000430682 DDHD2O94830 711 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 BCAR1P56945 870 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 PLCB3Q01970 1234 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 UBE3AQ05086 875 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 GNL2Q13823 731 aaKnown RBP13.91□□□□□ -0.18
SMPD4-204ENST00000430682 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 IGSF22Q8N9C0 903 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 MRPS27Q92552 414 aaKnown RBP13.91□□□□□ -0.18
SMPD4-204ENST00000430682 ZNF558Q96NG5 402 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 NACC1Q96RE7 527 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 MMTAG2Q9BU76 263 aaKnown RBP13.91□□□□□ -0.18
SMPD4-204ENST00000430682 VN1R3Q9BXE9 311 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 TLR9Q9NR96 1032 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 AAASQ9NRG9 546 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 MIOSQ9NXC5 875 aa13.91□□□□□ -0.18
SMPD4-204ENST00000430682 DBR1Q9UK59 544 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms