RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 MYOTQ9UBF9 498 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 RWDD3Q9Y3V2 267 aa5.09□□□□□ -1.59
HMGB3-203ENST00000430118 CAMTA1Q9Y6Y1 1673 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 FITM1A5D6W6 292 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 FAM227AF5H4B4 570 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 H3BML4 177 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 MAFGO15525 162 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 SRGAP3O43295 1099 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 CTNND1O60716 968 aaKnown RBP5.08□□□□□ -1.6
HMGB3-203ENST00000430118 GLI4P10075 376 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 IL12RB1P42701 662 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 KRT72Q14CN4 511 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 SEC23AQ15436 765 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 AOC3Q16853 763 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 UGT8Q16880 541 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 COBLL1Q53SF7 1204 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 HSP90AB4PQ58FF6 505 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 TTC38Q5R3I4 469 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 MBNL2Q5VZF2 373 aaKnown RBP5.08□□□□□ -1.6
HMGB3-203ENST00000430118 BTBD8Q5XKL5 378 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 LILRA6Q6PI73 481 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 CEP128Q6ZU80 1094 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 TOGARAM2Q6ZUX3 1019 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 CMIPQ8IY22 773 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 SPICE1Q8N0Z3 855 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 OXR1Q8N573 874 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 PDZD8Q8NEN9 1154 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 AUTS2Q8WXX7 1259 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 RTF1Q92541 710 aaKnown RBP5.08□□□□□ -1.6
HMGB3-203ENST00000430118 GJA10Q969M2 543 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 C1GALT1C1Q96EU7 318 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 ZNF496Q96IT1 587 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-203ENST00000430118 ALPK1Q96QP1 1244 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 MAP3K14Q99558 947 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 ELAC2Q9BQ52 826 aaKnown RBP5.08□□□□□ -1.6
HMGB3-203ENST00000430118 CD244Q9BZW8 370 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 UBA5Q9GZZ9 404 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 HSPBP1Q9NZL4 362 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 SAP30BPQ9UHR5 308 aaKnown RBP5.08□□□□□ -1.6
HMGB3-203ENST00000430118 TMEM59LQ9UK28 342 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 NUDT5Q9UKK9 219 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 PCDHB4Q9Y5E5 795 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 NUMBLQ9Y6R0 609 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 KIF1BO60333 1816 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 RGPD3A6NKT7 1758 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-203ENST00000430118 RGPD4Q7Z3J3 1758 aa5.08□□□□□ -1.6
HMGB3-203ENST00000430118 NUP155O75694 1391 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 ST20-MTHFSA0A0A6YYL1 179 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 UBA6A0AVT1 1052 aaPredicted RBP5.07□□□□□ -1.6
HMGB3-203ENST00000430118 FAM90A27PA6NNH2 459 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 KCNK3O14649 394 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 AP1G1O43747 822 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 NDUFS2O75306 463 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 ZBTB7AO95365 584 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 RHCEP18577 417 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 USP14P54578 494 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 RHDQ02161 417 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 MVKQ03426 396 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 IKZF1Q13422 519 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 TUSC3Q13454 348 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 GALEQ14376 348 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 MUM1Q2TAK8 710 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 CCDC178Q5BJE1 867 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 GJC2Q5T442 439 aaPredicted RBP5.07□□□□□ -1.6
HMGB3-203ENST00000430118 KRT28Q7Z3Y7 464 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 RTN4RL1Q86UN2 441 aaPredicted RBP5.07□□□□□ -1.6
HMGB3-203ENST00000430118 PRR18Q8N4B5 295 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 DIS3LQ8TF46 1054 aaKnown RBP5.07□□□□□ -1.6
HMGB3-203ENST00000430118 PAWRQ96IZ0 340 aaKnown RBP5.07□□□□□ -1.6
HMGB3-203ENST00000430118 FOXB1Q99853 325 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 TMEM60Q9H2L4 133 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 RIC8BQ9NVN3 520 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 KLHL11Q9NVR0 708 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 IMPACTQ9P2X3 320 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 PPP2R3BQ9Y5P8 575 aa5.07□□□□□ -1.6
HMGB3-203ENST00000430118 FMN2Q9NZ56 1722 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 ROCK1Q13464 1354 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 EIF3AQ14152 1382 aaKnown RBP5.06□□□□□ -1.6
HMGB3-203ENST00000430118 SPATA31A5Q5VU36 1347 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 RPGRIP1LQ68CZ1 1315 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 SPATA31A7Q8IWB4 1347 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 CHD4Q14839 1912 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 A0A1W2PQJ5 194 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 PRR19A6NJB7 356 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 GOLGA6L22H0YM25 854 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 SLC27A2O14975 620 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 USP2O75604 605 aaPredicted RBP5.06□□□□□ -1.6
HMGB3-203ENST00000430118 FOSP01100 380 aaPredicted RBP5.06□□□□□ -1.6
HMGB3-203ENST00000430118 NTRK1P04629 796 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 C5AR1P21730 350 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 AOAHP28039 575 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 WASP42768 502 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 GPR15P49685 360 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 FAM193AP78312 1265 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 SRSF2Q01130 221 aaKnown RBP5.06□□□□□ -1.6
HMGB3-203ENST00000430118 SNX17Q15036 470 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 SLC14A2Q15849 920 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 MSMPQ1L6U9 139 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 TOR2AQ5JU69 321 aa5.06□□□□□ -1.6
HMGB3-203ENST00000430118 IL31Q6EBC2 164 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms