RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 BRD1O95696 1058 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 F13A1P00488 732 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 POLGP54098 1239 aaPredicted RBP18.88■□□□□ 0.61
UBE3D-204ENST00000430071 LAMTOR4Q0VGL1 99 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 EMC2Q15006 297 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 CLUL1Q15846 466 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 CTC1Q2NKJ3 1217 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 ZNF410Q86VK4 478 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 ZNF710Q8N1W2 664 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 PIGOQ8TEQ8 1089 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 TMEM117Q9H0C3 514 aa18.88■□□□□ 0.61
UBE3D-204ENST00000430071 MYH11P35749 1972 aa18.87■□□□□ 0.61
UBE3D-204ENST00000430071 DKC1O60832 514 aaKnown RBP eCLIP18.87■□□□□ 0.61
UBE3D-204ENST00000430071 SPATA31C1P0DKV0 1188 aa18.87■□□□□ 0.61
UBE3D-204ENST00000430071 ERVFC1P60507 584 aa18.87■□□□□ 0.61
UBE3D-204ENST00000430071 RBM10P98175 930 aaKnown RBP18.87■□□□□ 0.61
UBE3D-204ENST00000430071 TRIOO75962 3097 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 TBX10O75333 385 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 MED24O75448 989 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 FGF18O76093 207 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 RFC5P40937 340 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 PHKA2P46019 1235 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 PTGDRQ13258 359 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 NAALADL2Q58DX5 795 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 PTCRAQ6ISU1 281 aaPredicted RBP18.86■□□□□ 0.61
UBE3D-204ENST00000430071 CATSPER4Q7RTX7 472 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 RBM23Q86U06 439 aaKnown RBP18.86■□□□□ 0.61
UBE3D-204ENST00000430071 ASAP3Q8TDY4 903 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 SLC7A3Q8WY07 619 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 PIN4Q9Y237 131 aaKnown RBP18.86■□□□□ 0.61
UBE3D-204ENST00000430071 PCDHB12Q9Y5F1 795 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 MYO10Q9HD67 2058 aa18.86■□□□□ 0.61
UBE3D-204ENST00000430071 GRXCR2A6NFK2 248 aa18.85■□□□□ 0.61
UBE3D-204ENST00000430071 LYPLA2O95372 231 aa18.85■□□□□ 0.61
UBE3D-204ENST00000430071 OR52Z1P0C646 297 aa18.85■□□□□ 0.61
UBE3D-204ENST00000430071 HOXA11P31270 313 aaPredicted RBP18.85■□□□□ 0.61
UBE3D-204ENST00000430071 TWF2Q6IBS0 349 aaKnown RBP18.85■□□□□ 0.61
UBE3D-204ENST00000430071 FAM43BQ6ZT52 329 aaPredicted RBP18.85■□□□□ 0.61
UBE3D-204ENST00000430071 OTUD6AQ7L8S5 288 aa18.85■□□□□ 0.61
UBE3D-204ENST00000430071 PSPC1Q8WXF1 523 aaKnown RBP18.85■□□□□ 0.61
UBE3D-204ENST00000430071 MTRQ99707 1265 aa18.85■□□□□ 0.61
UBE3D-204ENST00000430071 JPH2Q9BR39 696 aaPredicted RBP18.85■□□□□ 0.61
UBE3D-204ENST00000430071 DAXXQ9UER7 740 aaPredicted RBP18.85■□□□□ 0.61
UBE3D-204ENST00000430071 CLIC4Q9Y696 253 aa18.85■□□□□ 0.61
UBE3D-204ENST00000430071 NT5C1B-RDH14C9J2C7 533 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 PER2O15055 1255 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 B4GALT3O60512 393 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 SFPQP23246 707 aaKnown RBP eCLIP18.84■□□□□ 0.61
UBE3D-204ENST00000430071 TECP42680 631 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 RARRES1P49788 294 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 CDC42EP1Q00587 391 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 ADAM15Q13444 863 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 KCNT2Q6UVM3 1135 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 CATSPER3Q86XQ3 398 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 FAM178BQ8IXR5 827 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 THNSL1Q8IYQ7 743 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 RNF149Q8NC42 400 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 CHST12Q9NRB3 414 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 FAM105AQ9NUU6 356 aa18.84■□□□□ 0.61
UBE3D-204ENST00000430071 GLP2RO95838 553 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 EOMESO95936 686 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 NRIP1P48552 1158 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 AFF1P51825 1210 aaKnown RBP18.83■□□□□ 0.61
UBE3D-204ENST00000430071 ATP2C1P98194 919 aaPredicted RBP18.83■□□□□ 0.61
UBE3D-204ENST00000430071 SF3A1Q15459 793 aaKnown RBP18.83■□□□□ 0.61
UBE3D-204ENST00000430071 IL17AQ16552 155 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 FOXD4L6Q3SYB3 417 aaPredicted RBP18.83■□□□□ 0.61
UBE3D-204ENST00000430071 UBXN11Q5T124 520 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 FOXD4L3Q6VB84 417 aaPredicted RBP18.83■□□□□ 0.61
UBE3D-204ENST00000430071 USP28Q96RU2 1077 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 INO80BQ9C086 356 aaPredicted RBP18.83■□□□□ 0.61
UBE3D-204ENST00000430071 EPHX3Q9H6B9 360 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 GPRC5CQ9NQ84 441 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 ANKEF1Q9NU02 776 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 AGPAT5Q9NUQ2 364 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 RNF216Q9NWF9 866 aaPredicted RBP18.83■□□□□ 0.61
UBE3D-204ENST00000430071 DACT1Q9NYF0 836 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 PPME1Q9Y570 386 aa18.83■□□□□ 0.61
UBE3D-204ENST00000430071 FSCN2O14926 492 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 LAG3P18627 525 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 CAPSQ13938 189 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 ECM1Q16610 540 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 POTEGQ6S5H5 508 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 AGMOQ6ZNB7 445 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 MAEAQ7L5Y9 396 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 SRGAP1Q7Z6B7 1085 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 TMEM173Q86WV6 379 aaPredicted RBP18.82■□□□□ 0.6
UBE3D-204ENST00000430071 ABI1Q8IZP0 508 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 VN1R2Q8NFZ6 395 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 TRAIPQ9BWF2 469 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 POLD4Q9HCU8 107 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 AAASQ9NRG9 546 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 CLEC1BQ9P126 229 aa18.82■□□□□ 0.6
UBE3D-204ENST00000430071 LAD1O00515 517 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 HOXA2O43364 376 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 USO1O60763 962 aaKnown RBP18.81■□□□□ 0.6
UBE3D-204ENST00000430071 OFD1O75665 1012 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 GLRA2P23416 452 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 ARL2P36404 184 aa18.81■□□□□ 0.6
UBE3D-204ENST00000430071 CEBPZQ03701 1054 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms