RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 EIF3FO00303 357 aaPredicted RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 FOXN1O15353 648 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 FARP2O94887 1054 aaPredicted RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 GGPS1O95749 300 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 FUT4P22083 530 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 HOXD10P28358 340 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 CTGFP29279 349 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 QARSP47897 775 aaKnown RBP9.51□□□□□ -0.89
NUP98-207ENST00000429801 ACTR2P61160 394 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 ACVR2BQ13705 512 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 CCDC144BQ3MJ40 725 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 CCDC70Q6NSX1 233 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 TAPT1Q6NXT6 567 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 CCDC62Q6P9F0 684 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 SLC30A9Q6PML9 568 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 MTHFD1LQ6UB35 978 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 GRAMD1CQ8IYS0 662 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 TTC30BQ8N4P2 665 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 UBXN4Q92575 508 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 SCLT1Q96NL6 688 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 NACC1Q96RE7 527 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 LXNQ9BS40 222 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 ARHGAP39Q9C0H5 1083 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 FAM107BQ9H098 131 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 BLOC1S4Q9NUP1 217 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 TUBE1Q9UJT0 475 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 PCDHA5Q9Y5H7 936 aa9.51□□□□□ -0.89
NUP98-207ENST00000429801 E9PMD0 336 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 TIMM44O43615 452 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 ARIH2O95376 493 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 GNRH1P01148 92 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 MYBL1P10243 752 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 HOXD11P31277 338 aaPredicted RBP9.5□□□□□ -0.89
NUP98-207ENST00000429801 PSMC5P62195 406 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 DPYDQ12882 1025 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 ARHGEF6Q15052 776 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 SMUG1Q53HV7 270 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 CELF3Q5SZQ8 465 aaKnown RBP9.5□□□□□ -0.89
NUP98-207ENST00000429801 NT5DC1Q5TFE4 455 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 KIAA1328Q86T90 577 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 DRC7Q8IY82 874 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 LRRC15Q8TF66 581 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 STAMQ92783 540 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 ATP6V0A1Q93050 837 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 GSDMAQ96QA5 445 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 BEGAINQ9BUH8 593 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 KATNBL1Q9H079 304 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 PDGFCQ9NRA1 345 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 BMP2KQ9NSY1 1161 aaPredicted RBP9.5□□□□□ -0.89
NUP98-207ENST00000429801 MKS1Q9NXB0 559 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 MGAMO43451 1857 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 GPR25O00155 361 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 OPA1O60313 960 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 KRT38O76015 456 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 ATG7O95352 703 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 LYPLA2O95372 231 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 EYA4O95677 639 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 FESP07332 822 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 PLA2G4BP0C869 781 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 CDC25CP30307 473 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 C1QTNF8P60827 252 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 SP4Q02446 784 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 TYRO3Q06418 890 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 SFSWAPQ12872 951 aaKnown RBP9.5□□□□□ -0.89
NUP98-207ENST00000429801 MYBPC3Q14896 1274 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 KBTBD12Q3ZCT8 623 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 IQSEC1Q6DN90 963 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 CAPRIN2Q6IMN6 1127 aaKnown RBP9.5□□□□□ -0.89
NUP98-207ENST00000429801 OLFML1Q6UWY5 402 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 ABHD15Q6UXT9 468 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 KCNK18Q7Z418 384 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 TRMT44Q8IYL2 757 aaKnown RBP9.5□□□□□ -0.89
NUP98-207ENST00000429801 MAB21L3Q8N8X9 362 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 SPATA20Q8TB22 786 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 SEPT1Q8WYJ6 367 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 FUCA2Q9BTY2 467 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 IRF2BPLQ9H1B7 796 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 RETREG1Q9H6L5 497 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 BCAS3Q9H6U6 928 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 RMND1Q9NWS8 449 aa9.5□□□□□ -0.89
NUP98-207ENST00000429801 NOP56O00567 594 aaKnown RBP9.49□□□□□ -0.89
NUP98-207ENST00000429801 NKRFO15226 690 aaKnown RBP eCLIP9.49□□□□□ -0.89
NUP98-207ENST00000429801 SORBS3O60504 671 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 SSBP05455 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
NUP98-207ENST00000429801 SUPT20HL2P0C7V6 817 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 CCT5P48643 541 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 SARSP49591 514 aaKnown RBP9.49□□□□□ -0.89
NUP98-207ENST00000429801 FLT3LGP49771 235 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 ADCY1Q08828 1119 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 CUL4BQ13620 913 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 LAMC2Q13753 1193 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 STX1AQ16623 288 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 C4orf19Q8IY42 314 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 SYT2Q8N9I0 419 aaPredicted RBP9.49□□□□□ -0.89
NUP98-207ENST00000429801 CCDC47Q96A33 483 aaKnown RBP9.49□□□□□ -0.89
NUP98-207ENST00000429801 C7orf25Q9BPX7 421 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 TRIM9Q9C026 710 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 BLZF1Q9H2G9 400 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 ANO10Q9NW15 660 aa9.49□□□□□ -0.89
NUP98-207ENST00000429801 FLRT1Q9NZU1 646 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms