RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 CCDC169A6NNP5 214 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 NEBLO76041 1014 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 SGPL1O95470 568 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 MYBL1P10243 752 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 PYGMP11217 842 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 RPA1P27694 616 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 EDRF1Q3B7T1 1238 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 CCDC63Q8NA47 563 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 RFFLQ8WZ73 363 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 DHX38Q92620 1227 aaKnown RBP13.46□□□□□ -0.25
CDH3-202ENST00000429102 TMX4Q9H1E5 349 aaPredicted RBP13.46□□□□□ -0.25
CDH3-202ENST00000429102 FAM114A2Q9NRY5 505 aa13.46□□□□□ -0.25
CDH3-202ENST00000429102 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
CDH3-202ENST00000429102 TCP11X1B4DZS4 312 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 CCDC188H7C350 402 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 PDXKO00764 312 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 FSBPO95073 299 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 SOX10P56693 466 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 ANKS4BQ8N8V4 417 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 TRIM7Q9C029 511 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 DNAJC18Q9H819 358 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 FBXO28Q9NVF7 368 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 SPATA31A5Q5VU36 1347 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 SPATA31A7Q8IWB4 1347 aa13.46□□□□□ -0.26
CDH3-202ENST00000429102 A8MUI8 341 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 RASGRF2O14827 1237 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 TRIM37O94972 964 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 BARGINQ6ZT62 677 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 METTL14Q9HCE5 456 aaKnown RBP13.45□□□□□ -0.26
CDH3-202ENST00000429102 KCNMB3Q9NPA1 279 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 LRRC4BQ9NT99 713 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 TMEM59LQ9UK28 342 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 ABCB11O95342 1321 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 ARP10275 920 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 TNFRSF8P28908 595 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 JAG1P78504 1218 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 BIRC3Q13489 604 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 KYNUQ16719 465 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 SEL1L2Q5TEA6 688 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 TTC27Q6P3X3 843 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 MREGQ8N565 214 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 SUCLA2Q9P2R7 463 aaPredicted RBP13.45□□□□□ -0.26
CDH3-202ENST00000429102 WRAP73Q9P2S5 460 aaPredicted RBP13.45□□□□□ -0.26
CDH3-202ENST00000429102 TCEAL9Q9UHQ7 104 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 EZRP15311 586 aaKnown RBP13.45□□□□□ -0.26
CDH3-202ENST00000429102 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 KAZNQ674X7 775 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 HOOK3Q86VS8 718 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 PASD1Q8IV76 773 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 ACER1Q8TDN7 264 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 TBC1D22AQ8WUA7 517 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 C9orf72Q96LT7 481 aa13.45□□□□□ -0.26
CDH3-202ENST00000429102 TOPORSQ9NS56 1045 aaPredicted RBP13.45□□□□□ -0.26
CDH3-202ENST00000429102 A6NNZ2 444 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 GH1P01241 217 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 LMNB1P20700 586 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 CRKP46108 304 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 CLK2P49760 499 aaKnown RBP13.44□□□□□ -0.26
CDH3-202ENST00000429102 CALCOCO2Q13137 446 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 ABCB5Q2M3G0 1257 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 TUBB8Q3ZCM7 444 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 COBLL1Q53SF7 1204 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 ATP8B4Q8TF62 1192 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 ZNF653Q96CK0 615 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 STAMBPL1Q96FJ0 436 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 MTRF1LQ9UGC7 380 aaKnown RBP13.44□□□□□ -0.26
CDH3-202ENST00000429102 MYO3BQ8WXR4 1341 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 DRD4P21917 467 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 SMTNP53814 917 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 KCNJ2P63252 427 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 ZDHHC14Q8IZN3 488 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 ZNF577Q9BSK1 485 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 RASAL2Q9UJF2 1139 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 TTC7AQ9ULT0 858 aaPredicted RBP13.44□□□□□ -0.26
CDH3-202ENST00000429102 PPEF1O14829 653 aaPredicted RBP13.44□□□□□ -0.26
CDH3-202ENST00000429102 SLITRK3O94933 977 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 GABPAQ06546 454 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 RBM26Q5T8P6 1007 aaKnown RBP13.44□□□□□ -0.26
CDH3-202ENST00000429102 SYDE2Q5VT97 1194 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 CD302Q8IX05 232 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 SRRM1Q8IYB3 904 aaKnown RBP13.44□□□□□ -0.26
CDH3-202ENST00000429102 TATDN2Q93075 761 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 HAUS1Q96CS2 278 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 AGPAT1Q99943 283 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 AGPAT3Q9NRZ7 376 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 TRAF3IP3Q9Y228 551 aa13.44□□□□□ -0.26
CDH3-202ENST00000429102 TOM1O60784 492 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 HIP1RO75146 1068 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 SPAG7O75391 227 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 GJB6O95452 261 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 YY1P25490 414 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 BYSLQ13895 437 aaKnown RBP13.43□□□□□ -0.26
CDH3-202ENST00000429102 UBL4BQ8N7F7 174 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 PRELID2Q8N945 189 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 HES6Q96HZ4 224 aa13.43□□□□□ -0.26
CDH3-202ENST00000429102 VEZTQ9HBM0 779 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms