RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 NLRP7Q8WX94 980 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 POP1Q99575 1024 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 PYM1Q9BRP8 204 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 INO80BQ9C086 356 aaPredicted RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 VPS16Q9H269 839 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 IFT122Q9HBG6 1241 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 TAB2Q9NYJ8 693 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 NRBP1Q9UHY1 535 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 ARL2P36404 184 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 MYL5Q02045 173 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 DMP1Q13316 513 aaPredicted RBP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 CSGALNACT2Q8N6G5 542 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 MLKLQ8NB16 471 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 P2RX5Q93086 422 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 MAGEF1Q9HAY2 307 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 INTS13Q9NVM9 706 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 HES2Q9Y543 173 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 PCDHB13Q9Y5F0 798 aa10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.47□□□□□ -0.73
HMGCLL1-206ENST00000428842 HAS3O00219 553 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 PQBP1O60828 265 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 MNX1P50219 401 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 DLG4P78352 724 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 ITGA7Q13683 1181 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 ARID5BQ14865 1188 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 CEP135Q66GS9 1140 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 ELOA2Q8IYF1 753 aaPredicted RBP10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 SYCP3Q8IZU3 236 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 RMND1Q9NWS8 449 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 IFNKQ9P0W0 207 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 LARSQ9P2J5 1176 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 TRIP11Q15643 1979 aa10.46□□□□□ -0.73
HMGCLL1-206ENST00000428842 IGKV6-21A0A0C4DH24 114 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 B4GALT4O60513 344 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 ADCY5O95622 1261 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 TNFSF9P41273 254 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 ACOT2P49753 483 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 TPD52L1Q16890 204 aaPredicted RBP10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 KNOP1Q1ED39 458 aaKnown RBP10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 EEF1DP3Q658K8 133 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 CTU1Q7Z7A3 348 aaKnown RBP10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 U2AF1L4Q8WU68 220 aaKnown RBP10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 BICD1Q96G01 975 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 CCDC34Q96HJ3 373 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 PAK6Q9NQU5 681 aaPredicted RBP10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 TBX20Q9UMR3 447 aa10.46□□□□□ -0.74
HMGCLL1-206ENST00000428842 GOLGA6L19H0YKK7 550 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 PSMA7O14818 248 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 HNRNPDLO14979 420 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 PPP1R37O75864 691 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 AKAP3O75969 853 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 TFRCP02786 760 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 PTMAP06454 111 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 MAPTP10636 758 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 NR2F2P24468 414 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 ADAM17P78536 824 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 ZCWPW2Q504Y3 356 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 RNF180Q86T96 592 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 DEPTORQ8TB45 409 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 PSPC1Q8WXF1 523 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 DHX38Q92620 1227 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 ZNF333Q96JL9 665 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 DRC1Q96MC2 740 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 ZNF830Q96NB3 372 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 CRACR2AQ9BSW2 395 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 MTG1Q9BT17 334 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 XPO4Q9C0E2 1151 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 UPF3AQ9H1J1 476 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 SPC25Q9HBM1 224 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 OLFML3Q9NRN5 406 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 ODF2LQ9ULJ1 636 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 R3HCC1Q9Y3T6 440 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 TRIOO75962 3097 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 C17orf102A2RUQ5 167 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 TRIM49P0CI25 452 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 TRIM49CP0CI26 452 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 EN2P19622 333 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 CDK11BP21127 795 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 HSP90AA2PQ14568 343 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 PTGISQ16647 500 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 CENPPQ6IPU0 288 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 LRRC55Q6ZSA7 311 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 CBWD2Q8IUF1 395 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 TRIML1Q8N9V2 468 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 MCPH1Q8NEM0 835 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 STRA6Q9BX79 667 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 MCOLN1Q9GZU1 580 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 STARD7Q9NQZ5 370 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 TOPORSQ9NS56 1045 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 GTF2IRD1Q9UHL9 959 aa10.45□□□□□ -0.74
HMGCLL1-206ENST00000428842 SCN5AQ14524 2016 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 MEIS3P2A8K0S8 358 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 K7ERI5 159 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 MUTP22033 750 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 CCNE1P24864 410 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 THPOP40225 353 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 NCKAP1LP55160 1127 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 ADAM9Q13443 819 aa10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 BRDTQ58F21 947 aaPredicted RBP10.44□□□□□ -0.74
HMGCLL1-206ENST00000428842 GUF1Q8N442 669 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms