RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 PEX5P50542 639 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 NPEPPSP55786 919 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 SESN3P58005 492 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 CYP4X1Q8N118 509 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 NIP7Q9Y221 180 aaKnown RBP eCLIP17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 GPR75-ASB3A0A0A6YYF3 556 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 POTEB3A0JP26 581 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 POTECB2RU33 542 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 PYGLP06737 847 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 RARGP13631 454 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 SP100P23497 879 aaPredicted RBP17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 SLC5A9Q2M3M2 681 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 ZNF449Q6P9G9 518 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 CCDC137Q6PK04 289 aaKnown RBP17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 POTEBQ6S5H4 581 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 MOV10L1Q9BXT6 1211 aaKnown RBP17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 IKZF4Q9H2S9 585 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 TFCP2L1Q9NZI6 479 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 ASB3Q9Y575 518 aa17.66■□□□□ 0.42
RHBDF1-204ENST00000428730 ZNF142P52746 1687 aaPredicted RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 NUP98P52948 1817 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 XRCC5P13010 732 aaKnown RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 BRAFP15056 766 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 EPHB2P29323 1055 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 FOXN2P32314 431 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 DRG2P55039 364 aaKnown RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 CTTNQ14247 550 aaKnown RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 CAVIN4Q5BKX8 364 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 VSIG1Q86XK7 387 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 CPNE8Q86YQ8 564 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 CCDC65Q8IXS2 484 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 GALNT15Q8N3T1 639 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 CTNNBL1Q8WYA6 563 aaPredicted RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 SPOCK2Q92563 424 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 RAB3IPQ96QF0 476 aaPredicted RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 ANKIB1Q9P2G1 1089 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 STX2P32856 288 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 MRPS35P82673 323 aaKnown RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 RRP1BQ14684 758 aaKnown RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 UBE2SQ16763 222 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 C12orf60Q5U649 245 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 C3orf67Q6ZVT6 689 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 SLC30A5Q8TAD4 765 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 HAS1Q92839 578 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 RAB34Q9BZG1 259 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 SEC63Q9UGP8 760 aaKnown RBP17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 KAT6BQ8WYB5 2073 aa17.65■□□□□ 0.42
RHBDF1-204ENST00000428730 NPTXRO95502 500 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 PLA2G4BP0C869 781 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 CHKAP35790 457 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 NAP1L3Q99457 506 aaPredicted RBP17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 PAIP2Q9BPZ3 127 aaKnown RBP17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 LRRC27Q9C0I9 530 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 KIAA1683Q9H0B3 1180 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 BMP2KQ9NSY1 1161 aaPredicted RBP17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 NCANO14594 1321 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 KRT18P05783 430 aaKnown RBP17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 CETPP11597 493 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 HOXD13P35453 343 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 POLE2P56282 527 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 LAMB3Q13751 1172 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 FOXB2Q5VYV0 432 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 INTS8Q75QN2 995 aaKnown RBP17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 ZC3H3Q8IXZ2 948 aaKnown RBP17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 ASAP3Q8TDY4 903 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 PWWP2AQ96N64 755 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 SPZ1Q9BXG8 430 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 AAASQ9NRG9 546 aa17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 SAP30BPQ9UHR5 308 aaKnown RBP17.64■□□□□ 0.41
RHBDF1-204ENST00000428730 SMAPO00193 183 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 CLIC2O15247 247 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 CBX6O95503 412 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 CYP11B2P19099 503 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 GCLCP48506 637 aaPredicted RBP17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 KLC1Q07866 573 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 PDIA5Q14554 519 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 TBC1D25Q3MII6 688 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 RNF43Q68DV7 783 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 DNAJC9Q8WXX5 260 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 LRMDAQ9H2I8 198 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 INTUQ9ULD6 942 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 CHKBQ9Y259 395 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 ALG6Q9Y672 507 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 FRMPD2Q68DX3 1309 aaPredicted RBP17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 ANKRD36CQ5JPF3 1778 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 ERVV-1B6SEH8 477 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 MARCH6O60337 910 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 TMEM253P0C7T8 217 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 ALDH3A1P30838 453 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 RBM5P52756 815 aaKnown RBP eCLIP17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 GRIPAP1Q4V328 841 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 PRUNE1Q86TP1 453 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 SRRM1Q8IYB3 904 aaKnown RBP17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 ART4Q93070 314 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 EPAS1Q99814 870 aa17.63■□□□□ 0.41
RHBDF1-204ENST00000428730 TBC1D10AQ9BXI6 508 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms