RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 HAS3O00219 553 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 ADAMTS3O15072 1205 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 SPTLC2O15270 562 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 PI15O43692 258 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 SORBS3O60504 671 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 STAM2O75886 525 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 GGPS1O95749 300 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 F2P00734 622 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 CMA1P23946 247 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 ATXN1P54253 815 aaKnown RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 RBM10P98175 930 aaKnown RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 GUCY1B3Q02153 619 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 LAMC2Q13753 1193 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 CELF3Q5SZQ8 465 aaKnown RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 PPP1R18Q6NYC8 613 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 ZC3H14Q6PJT7 736 aaKnown RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 CCDC73Q6ZRK6 1079 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 SERINC5Q86VE9 423 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 ELOA2Q8IYF1 753 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 FMR1NBQ8N0W7 255 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 KLHL23Q8NBE8 558 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 RDH13Q8NBN7 331 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 CUL5Q93034 780 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 TIGD1Q96MW7 591 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 RTP3Q9BQQ7 232 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 APOL5Q9BWW9 433 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 BARHL2Q9NY43 387 aa9.73□□□□□ -0.85
HDAC1-202ENST00000428704 NOL7Q9UMY1 257 aaKnown RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 V9GY48 417 aaPredicted RBP9.73□□□□□ -0.85
HDAC1-202ENST00000428704 RALGAPA2Q2PPJ7 1873 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 C2CD4DB7Z1M9 353 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 hCG_1984214I3L0E3 225 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 ASGR2P07307 311 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 ADRB1P08588 477 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 TGFB3P10600 412 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 CD46P15529 392 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 ITGB5P18084 799 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 TECP42680 631 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 ME1P48163 572 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 CLK2P49760 499 aaKnown RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 NAPAP54920 295 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 TYRO3Q06418 890 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 DMWDQ09019 674 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 STK38Q15208 465 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 PTPAQ15257 358 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 SAFBQ15424 915 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 PFKFB3Q16875 520 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 AXDND1Q5T1B0 1012 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 XRRA1Q6P2D8 792 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 KCNV1Q6PIU1 500 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 SASS6Q6UVJ0 657 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 ZSCAN30Q86W11 494 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 FAM177A1Q8N128 213 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 ZNF713Q8N859 430 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 RNF214Q8ND24 703 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 VN1R2Q8NFZ6 395 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 ATP8B4Q8TF62 1192 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 RIN2Q8WYP3 895 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 MRPS27Q92552 414 aaKnown RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 PHKBQ93100 1093 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 CDCA3Q99618 268 aaPredicted RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 C16orf70Q9BSU1 422 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 SLC26A6Q9BXS9 759 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 OSBPL7Q9BZF2 842 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 S1PR5Q9H228 398 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 RC3H2Q9HBD1 1191 aaKnown RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 RIC8AQ9NPQ8 531 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 CDV3Q9UKY7 258 aaKnown RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 PCDHA6Q9UN73 950 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 PCDHA8Q9Y5H6 950 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 UBIAD1Q9Y5Z9 338 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 CLIC4Q9Y696 253 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 MRPL42Q9Y6G3 142 aaKnown RBP9.72□□□□□ -0.85
HDAC1-202ENST00000428704 WDR81Q562E7 1941 aa9.72□□□□□ -0.85
HDAC1-202ENST00000428704 FAM208BQ5VWN6 2430 aa9.71□□□□□ -0.85
HDAC1-202ENST00000428704 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 ATP9AO75110 1047 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 PPFIA3O75145 1194 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 CAND2O75155 1236 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 CFHP08603 1231 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 SCG2P13521 617 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 KCNA2P16389 499 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 XBP1P17861 261 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 ADCY7P51828 1080 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 CEBPZQ03701 1054 aaKnown RBP9.71□□□□□ -0.86
HDAC1-202ENST00000428704 SF3A1Q15459 793 aaKnown RBP9.71□□□□□ -0.86
HDAC1-202ENST00000428704 DUSP6Q16828 381 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 GNPTABQ3T906 1256 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 RILPL1Q5EBL4 403 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 ANKRD54Q6NXT1 300 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 NOSTRINQ8IVI9 506 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 ATP6V0A1Q93050 837 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 ZNF689Q96CS4 500 aaPredicted RBP9.71□□□□□ -0.86
HDAC1-202ENST00000428704 GPRASP2Q96D09 838 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 SPATA33Q96N06 139 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 AIFM3Q96NN9 605 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 PRR14Q9BWN1 585 aa9.71□□□□□ -0.86
HDAC1-202ENST00000428704 RRAGDQ9NQL2 400 aaPredicted RBP9.71□□□□□ -0.86
HDAC1-202ENST00000428704 GJB4Q9NTQ9 266 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms