RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ANKRD54Q6NXT1 300 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 HFE2Q6ZVN8 426 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 CATSPER4Q7RTX7 472 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 NSUN7Q8NE18 718 aaKnown RBP17.38■□□□□ 0.37
SEC13-210ENST00000428626 PRPF31Q8WWY3 499 aaKnown RBP17.38■□□□□ 0.37
SEC13-210ENST00000428626 GTF3C6Q969F1 213 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 CEP170P1Q96L14 293 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 NRDE2Q9H7Z3 1164 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 NGRNQ9NPE2 291 aaKnown RBP17.38■□□□□ 0.37
SEC13-210ENST00000428626 FAM105AQ9NUU6 356 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 TBC1D13Q9NVG8 400 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 PUF60Q9UHX1 559 aaKnown RBP17.38■□□□□ 0.37
SEC13-210ENST00000428626 COL4A3BPQ9Y5P4 624 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 PIEZO1Q92508 2521 aa17.38■□□□□ 0.37
SEC13-210ENST00000428626 C2orf71A6NGG8 1288 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 ZNF623O75123 536 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 OFD1O75665 1012 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 SEC24BO95487 1268 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 TECP42680 631 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 CYP4A11Q02928 519 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 UBXN11Q5T124 520 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 NCAPH2Q6IBW4 605 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 TMC7Q7Z402 723 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 C4orf19Q8IY42 314 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 MRPL43Q8N983 215 aaKnown RBP17.37■□□□□ 0.37
SEC13-210ENST00000428626 FEZF2Q8TBJ5 459 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 AUTS2Q8WXX7 1259 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 RPGRIP1Q96KN7 1286 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 PHF7Q9BWX1 381 aaPredicted RBP17.37■□□□□ 0.37
SEC13-210ENST00000428626 VN1R3Q9BXE9 311 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 XPNPEP1Q9NQW7 623 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 AGPAT5Q9NUQ2 364 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 PPP4R2Q9NY27 417 aa17.37■□□□□ 0.37
SEC13-210ENST00000428626 ZDBF2Q9HCK1 2354 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 BTBD18B2RXH4 712 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 ZC3H11AO75152 810 aaKnown RBP eCLIP17.36■□□□□ 0.37
SEC13-210ENST00000428626 SLITRK3O94933 977 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 NEFLP07196 543 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 SRGAP2CP0DJJ0 459 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 XBP1P17861 261 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
SEC13-210ENST00000428626 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
SEC13-210ENST00000428626 KRT2P35908 639 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 FOSBP53539 338 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 POLGP54098 1239 aaPredicted RBP17.36■□□□□ 0.37
SEC13-210ENST00000428626 KRT17Q04695 432 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 LAMTOR4Q0VGL1 99 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 AGMOQ6ZNB7 445 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 ZNF280BQ86YH2 543 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 SLC7A3Q8WY07 619 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 MRPL9Q9BYD2 267 aaKnown RBP17.36■□□□□ 0.37
SEC13-210ENST00000428626 INO80BQ9C086 356 aaPredicted RBP17.36■□□□□ 0.37
SEC13-210ENST00000428626 DNAJB4Q9UDY4 337 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 INPP5FQ9Y2H2 1132 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 HCFC2Q9Y5Z7 792 aa17.36■□□□□ 0.37
SEC13-210ENST00000428626 CLASP2O75122 1294 aaKnown RBP17.35■□□□□ 0.37
SEC13-210ENST00000428626 EMC2Q15006 297 aa17.35■□□□□ 0.37
SEC13-210ENST00000428626 XKR9Q5GH70 373 aa17.35■□□□□ 0.37
SEC13-210ENST00000428626 NOMO2Q5JPE7 1267 aa17.35■□□□□ 0.37
SEC13-210ENST00000428626 EDAQ92838 391 aa17.35■□□□□ 0.37
SEC13-210ENST00000428626 JPH2Q9BR39 696 aaPredicted RBP17.35■□□□□ 0.37
SEC13-210ENST00000428626 ZBP1Q9H171 429 aa17.35■□□□□ 0.37
SEC13-210ENST00000428626 PCDHB2Q9Y5E7 798 aa17.35■□□□□ 0.37
SEC13-210ENST00000428626 A0A087WWV3 80 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 DDHD2O94830 711 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 GALTP07902 379 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 RFC5P40937 340 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 SLC11A1P49279 550 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 ALDH7A1P49419 539 aaKnown RBP17.34■□□□□ 0.37
SEC13-210ENST00000428626 SMC1AQ14683 1233 aaKnown RBP17.34■□□□□ 0.37
SEC13-210ENST00000428626 ANKRD1Q15327 319 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 KANK3Q6NY19 840 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 SRGAP1Q7Z6B7 1085 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 MRPL10Q7Z7H8 261 aaKnown RBP17.34■□□□□ 0.37
SEC13-210ENST00000428626 FERMT3Q86UX7 667 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 TPH2Q8IWU9 490 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 VPS52Q8N1B4 723 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 PSPC1Q8WXF1 523 aaKnown RBP17.34■□□□□ 0.37
SEC13-210ENST00000428626 WASF1Q92558 559 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 IGSF21Q96ID5 467 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 HSD17B14Q9BPX1 270 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 EIF2AK1Q9BQI3 630 aaKnown RBP17.34■□□□□ 0.37
SEC13-210ENST00000428626 ZSWIM4Q9H7M6 989 aa17.34■□□□□ 0.37
SEC13-210ENST00000428626 FSD2A1L4K1 749 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 MARCH6O60337 910 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 DKC1O60832 514 aaKnown RBP eCLIP17.33■□□□□ 0.36
SEC13-210ENST00000428626 CXCL14O95715 111 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 SP100P23497 879 aaPredicted RBP17.33■□□□□ 0.36
SEC13-210ENST00000428626 RAB27AP51159 221 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 NEK4P51957 841 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 GLB1LQ6UWU2 654 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 DIS3L2Q8IYB7 885 aaKnown RBP17.33■□□□□ 0.36
SEC13-210ENST00000428626 SLFN12Q8IYM2 578 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 RNF149Q8NC42 400 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
SEC13-210ENST00000428626 TMEM169Q96HH4 297 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 NAP1L4Q99733 375 aaKnown RBP17.33■□□□□ 0.36
SEC13-210ENST00000428626 GBP3Q9H0R5 595 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 PPME1Q9Y570 386 aa17.33■□□□□ 0.36
SEC13-210ENST00000428626 MYO10Q9HD67 2058 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms