RNA–Protein interactions for RNA: ENST00000428336.5

TSPO-204, Transcript of translocator protein, humanhuman

TSL 5

Gene TSPO, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-204ENST00000428336 TLR9Q9NR96 1032 aa17.19■□□□□ 0.34
TSPO-204ENST00000428336 LZTS1Q9Y250 596 aa17.19■□□□□ 0.34
TSPO-204ENST00000428336 FNDC1Q4ZHG4 1894 aaPredicted RBP17.18■□□□□ 0.34
TSPO-204ENST00000428336 MEIS3P2A8K0S8 358 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 SKIP12755 728 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 XRCC6P12956 609 aaKnown RBP eCLIP17.18■□□□□ 0.34
TSPO-204ENST00000428336 PBX3P40426 434 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 NRIP1P48552 1158 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 ORC2Q13416 577 aaPredicted RBP17.18■□□□□ 0.34
TSPO-204ENST00000428336 NOSTRINQ8IVI9 506 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 EFHBQ8N7U6 833 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 MICAL1Q8TDZ2 1067 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
TSPO-204ENST00000428336 MRPS27Q92552 414 aaKnown RBP17.18■□□□□ 0.34
TSPO-204ENST00000428336 MED24O75448 989 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 DGAT1O75907 488 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 OR52Z1P0C646 297 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 ARL2P36404 184 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 TECP42680 631 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 TRAPPC10P48553 1259 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 RAB27AP51159 221 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 PTENP60484 403 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 MXD4Q14582 209 aaPredicted RBP17.17■□□□□ 0.34
TSPO-204ENST00000428336 LONRF3Q496Y0 759 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 TTC38Q5R3I4 469 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 PDE12Q6L8Q7 609 aaKnown RBP17.17■□□□□ 0.34
TSPO-204ENST00000428336 RBM23Q86U06 439 aaKnown RBP17.17■□□□□ 0.34
TSPO-204ENST00000428336 CATSPER3Q86XQ3 398 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 SLC39A11Q8N1S5 342 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 C4orf32Q8N8J7 132 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 ASAP3Q8TDY4 903 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 KHSRPQ92945 711 aaKnown RBP eCLIP17.17■□□□□ 0.34
TSPO-204ENST00000428336 MSLNLQ96KJ4 702 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 MRPL9Q9BYD2 267 aaKnown RBP17.17■□□□□ 0.34
TSPO-204ENST00000428336 TLE6Q9H808 572 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 TUFT1Q9NNX1 390 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 SPG21Q9NZD8 308 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 CLEC1BQ9P126 229 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 PCDHB2Q9Y5E7 798 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 KIAA1671Q9BY89 1806 aa17.17■□□□□ 0.34
TSPO-204ENST00000428336 PER2O15055 1255 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 MBTPS2O43462 519 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 OFD1O75665 1012 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 GLP2RO95838 553 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 U2AF2P26368 475 aaKnown RBP eCLIP17.16■□□□□ 0.34
TSPO-204ENST00000428336 PPM1AP35813 382 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 POU5F1BQ06416 359 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 NBR1Q14596 966 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 CLUL1Q15846 466 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 UBXN11Q5T124 520 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 MRPL10Q7Z7H8 261 aaKnown RBP17.16■□□□□ 0.34
TSPO-204ENST00000428336 IFNLR1Q8IU57 520 aaPredicted RBP17.16■□□□□ 0.34
TSPO-204ENST00000428336 GJD3Q8N144 294 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 RSPH1Q8WYR4 309 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 POLR3CQ9BUI4 534 aaPredicted RBP17.16■□□□□ 0.34
TSPO-204ENST00000428336 EPHX3Q9H6B9 360 aa17.16■□□□□ 0.34
TSPO-204ENST00000428336 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
TSPO-204ENST00000428336 GLRA2P23416 452 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 TOB1P50616 345 aaPredicted RBP17.15■□□□□ 0.34
TSPO-204ENST00000428336 CAPSQ13938 189 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 DUSP6Q16828 381 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 NOMO2Q5JPE7 1267 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 GLB1LQ6UWU2 654 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 AGMOQ6ZNB7 445 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 TCF25Q9BQ70 676 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 TBC1D13Q9NVG8 400 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 PUF60Q9UHX1 559 aaKnown RBP17.15■□□□□ 0.34
TSPO-204ENST00000428336 CD207Q9UJ71 328 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 FAM50BQ9Y247 325 aa17.15■□□□□ 0.34
TSPO-204ENST00000428336 NT5C1B-RDH14C9J2C7 533 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 ST18O60284 1047 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 TSPAN1O60635 241 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 USO1O60763 962 aaKnown RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 EYA4O95677 639 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 RPA1P27694 616 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 NDUFV1P49821 464 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 BCAR1P56945 870 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 RBM10P98175 930 aaKnown RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 KRT17Q04695 432 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 MBTD1Q05BQ5 628 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 SMAD4Q13485 552 aaKnown RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 GNL2Q13823 731 aaKnown RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 TFDP1Q14186 410 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 PCBP1Q15365 356 aaKnown RBP eCLIP17.14■□□□□ 0.33
TSPO-204ENST00000428336 SMAD2Q15796 467 aaKnown RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 PLPP4Q5VZY2 271 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 VN1R2Q8NFZ6 395 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 PGBD4Q96DM1 585 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 TMX3Q96JJ7 454 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 NACC1Q96RE7 527 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 CDCA3Q99618 268 aaPredicted RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 NRDE2Q9H7Z3 1164 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 NGRNQ9NPE2 291 aaKnown RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 GPRC5CQ9NQ84 441 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 PRKAG3Q9UGI9 489 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 DBR1Q9UK59 544 aaKnown RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 BARX2Q9UMQ3 279 aaPredicted RBP17.14■□□□□ 0.33
TSPO-204ENST00000428336 INPP5FQ9Y2H2 1132 aa17.14■□□□□ 0.33
TSPO-204ENST00000428336 BDP1A6H8Y1 2624 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms