RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 FAM205CA6NFA0 338 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 B4GALT3O60512 393 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 PPM1AP35813 382 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 BCAR1P56945 870 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 ZXDAP98168 799 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 CDC42EP1Q00587 391 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 KRT17Q04695 432 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 LONRF3Q496Y0 759 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 PPP4R3AQ6IN85 833 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 CPLX2Q6PUV4 134 aaKnown RBP11.27□□□□□ -0.61
GACAT3-201ENST00000426539 TMC7Q7Z402 723 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 NEK8Q86SG6 692 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 ZNF410Q86VK4 478 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 RHPN2Q8IUC4 686 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 MRPL43Q8N983 215 aaKnown RBP11.27□□□□□ -0.61
GACAT3-201ENST00000426539 BCL7CQ8WUZ0 217 aaPredicted RBP11.27□□□□□ -0.61
GACAT3-201ENST00000426539 RPGRIP1Q96KN7 1286 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 FAM20AQ96MK3 541 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 IFT122Q9HBG6 1241 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 CYP26B1Q9NR63 512 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 DACT1Q9NYF0 836 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 STK36Q9NRP7 1315 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 WDR81Q562E7 1941 aa11.27□□□□□ -0.61
GACAT3-201ENST00000426539 C5orf42Q9H799 3197 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 FSD2A1L4K1 749 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 PFKFB2O60825 505 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 CLASP2O75122 1294 aaKnown RBP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 ZNF623O75123 536 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 OFD1O75665 1012 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 SFPQP23246 707 aaKnown RBP eCLIP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 QARSP47897 775 aaKnown RBP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 DNM2P50570 870 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 SPIRE1Q08AE8 756 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 TRIM67Q6ZTA4 783 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 PIK3AP1Q6ZUJ8 805 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 BMP8AQ7Z5Y6 402 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 FEZF2Q8TBJ5 459 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 TNFRSF25Q93038 417 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 NLRP4Q96MN2 994 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 MRPL9Q9BYD2 267 aaKnown RBP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 SLKQ9H2G2 1235 aaPredicted RBP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 DHX33Q9H6R0 707 aaKnown RBP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 NRDE2Q9H7Z3 1164 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 MINDY3Q9H8M7 445 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 FAM105AQ9NUU6 356 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 TBC1D13Q9NVG8 400 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 PIN4Q9Y237 131 aaKnown RBP11.26□□□□□ -0.61
GACAT3-201ENST00000426539 HCFC2Q9Y5Z7 792 aa11.26□□□□□ -0.61
GACAT3-201ENST00000426539 MUC6Q6W4X9 2439 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 CCDC194A0A1B0GVG4 234 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 TMEM221A6NGB7 291 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 M0R296 226 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 ZBTB39O15060 712 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 CDKL5O76039 1030 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 P4HBP07237 508 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 GALTP07902 379 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 GCFC2P16383 781 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 HOXA11P31270 313 aaPredicted RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 AFF1P51825 1210 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 NHLH1Q02575 133 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 EPHA7Q15375 998 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 UBXN11Q5T124 520 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 TWF2Q6IBS0 349 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 CATSPER4Q7RTX7 472 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 ALYREFQ86V81 257 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 VPS52Q8N1B4 723 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 PRPF31Q8WWY3 499 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 AUTS2Q8WXX7 1259 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 SLC39A7Q92504 469 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 CASP10Q92851 521 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 TMEM143Q96AN5 459 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 CEP170P1Q96L14 293 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 MFSD14AQ96MC6 490 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 VN1R3Q9BXE9 311 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 INO80BQ9C086 356 aaPredicted RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 ZBP1Q9H171 429 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 RYDENQ9NUL5 291 aaKnown RBP11.25□□□□□ -0.61
GACAT3-201ENST00000426539 AGPAT5Q9NUQ2 364 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 RGL1Q9NZL6 768 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 DNAJB4Q9UDY4 337 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 COL4A3BPQ9Y5P4 624 aa11.25□□□□□ -0.61
GACAT3-201ENST00000426539 WNT7AO00755 349 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 TBX3O15119 743 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 CCNT1O60563 726 aaKnown RBP11.24□□□□□ -0.61
GACAT3-201ENST00000426539 ZC3H11AO75152 810 aaKnown RBP eCLIP11.24□□□□□ -0.61
GACAT3-201ENST00000426539 LARGE1O95461 756 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 CXCL14O95715 111 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 SRGAP2BP0DMP2 458 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 SKIP12755 728 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 HOXB8P17481 243 aaPredicted RBP11.24□□□□□ -0.61
GACAT3-201ENST00000426539 SP100P23497 879 aaPredicted RBP11.24□□□□□ -0.61
GACAT3-201ENST00000426539 SLC11A1P49279 550 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 ALDH7A1P49419 539 aaKnown RBP11.24□□□□□ -0.61
GACAT3-201ENST00000426539 AK2P54819 239 aa11.24□□□□□ -0.61
GACAT3-201ENST00000426539 NR5A1Q13285 461 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms